Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1864 ATGTCTGTGAAGCCAACAGTGACTCGTTTCCCGAAGAGCGAAATTGGCCTCTCTTTCATTTCCATAGGGAATAGCATCACTTGCAAGAGCAAAGGCCAATTTTTGTCGCACTTCACAAGTTCGCAAAGTGCCAATCGGAGGTGCTATAAGAGCTTTGAAGTTAGGAATTTGAAGACTTCTTGCCACTTATGTGTGTCAGAGAATGAGGAGTACGGTAACGTTGATTCTGGGTTCCAGAAGGCGTTTGGCTTTGCTCAGTTCATTTTACCAGGTGGGAGCTGGTGGAACTTATCTGAGCGTCAGCAAGACGATGTTGAAGCGGCGAAGCCAATTTCAGCGCTACTCGCCCTTCGCCGAATGTGGGTTTTAATTTCCGATGAGAAATGGATTATCTTTGTGGCTTTTGGTTCACTTGTCATCGCTGCTCTTTCAGAGATCTCCATGCCAAGCATATTGGCTGCGTCAATATTTTTAGCTCAGAGTGGTGAGACTTTGGGGTTTTATAGGAAGGCACAGTCTTTACTTGTTTTGTGTTTCACTTCAGGGATATGCAGTGGTCTGCGAAGTGGCTGCTTTGGAATTTTGAATGTAATCTTGGTAAGGTGTCTACGAGAAAACCTATATACAGCTCTTCTTTTTCAGGACATATCCTATTTTGATAGAGAACAAGTTGGTGACTTAACAAGCAGGCTTTCAGCAGATTGCCAACGACTATCTTATGTTATAGGAAATGATCTTCATTTGATCTTGCGCAACACTCTTCAGGGAACAGGAGCAGTTATTAACTTGCTGACTTTATCATGGCCTCTGGCATTGTCTACCTTGGTGATTTGCTCTATTTTGTCTGCAATTTTCCTGGTTTATGGCCAGTATCAAAGAAAAGCAGCAAAGTTGACTCAAGATTTCACAGCTAGTGCTAATGAAGTAGCACAGGAAACACTTTCTTTGGTAAGAACAGTTCGAGCCTATGGCACAGAAGTAGAAGAAGTTGGAAGGTACAAGCAATGGCTGCAGAGATTGGCATCTGTAAATACTCGAGAGAGCTTGGCTTATGGTTTCTGGAATCTGAGTTTTAACACCCTATACCGTTCAACTCAGATATTTGCCGTGCTGTTAGGAGGGATGTCTGTTCTCAGTTGTTCTGTAACTGTGGAGCAACTTACTAAGTATGTATTGTACTGTGAGTGGCTGATTTATGCTACTTGGAGGGTGACAAATAGCTTATCATCATTACTGCAGTCCATTGGAGCATGTGAAAATGTTTTCCAAATGATGGATCTCTTGCCCAGTGACCAATTCTTATCTAAAGGAGTGAAGTTGCAGAGGTTAAAGGGGCATATTCAGTTTGTAGATGTATCATTTTGTTATCCTACAAGGATCATGGTGCCTATTCTAGAACGCTTAAACTTTTGTGTAGAAGCAAATGAGGTGATTGCAATAGTTGGTCTTAGTGGTAGTGGAAAGAGCACATTACTCAACCTTCTACTTCGTCTATATGAGCCAAGTAATGGTCAGATTTACATTGATGGGTTCCCTCTCAGAGAGTTTGATATAAGGTGGCTGAGACAAAACATTGGATATATAGCACAGACAGGAGCCACATCTCTTCCACATGGACATCAAGTCAAACATAAAATACGGTTGCCCTAG 1650 0.4212 MSVKPTVTRFPKSEIGLSFISIGNSITCKSKGQFLSHFTSSQSANRRCYKSFEVRNLKTSCHLCVSENEEYGNVDSGFQKAFGFAQFILPGGSWWNLSERQQDDVEAAKPISALLALRRMWVLISDEKWIIFVAFGSLVIAALSEISMPSILAASIFLAQSGETLGFYRKAQSLLVLCFTSGICSGLRSGCFGILNVILVRCLRENLYTALLFQDISYFDREQVGDLTSRLSADCQRLSYVIGNDLHLILRNTLQGTGAVINLLTLSWPLALSTLVICSILSAIFLVYGQYQRKAAKLTQDFTASANEVAQETLSLVRTVRAYGTEVEEVGRYKQWLQRLASVNTRESLAYGFWNLSFNTLYRSTQIFAVLLGGMSVLSCSVTVEQLTKYVLYCEWLIYATWRVTNSLSSLLQSIGACENVFQMMDLLPSDQFLSKGVKLQRLKGHIQFVDVSFCYPTRIMVPILERLNFCVEANEVIAIVGLSGSGKSTLLNLLLRLYEPSNGQIYIDGFPLREFDIRWLRQNIGYIAQTGATSLPHGHQVKHKIRLP 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1864 549 Gene3D ABC transporter type 1, transmembrane domain 112 431 IPR036640 GO:0005524|GO:0016020
Dere01g1864 549 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 132 413 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere01g1864 549 SUPERFAMILY ABC transporter transmembrane region 118 431 IPR036640 GO:0005524|GO:0016020
Dere01g1864 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 531 IPR027417 -
Dere01g1864 549 Pfam ABC transporter 465 538 IPR003439 GO:0005524
Dere01g1864 549 CDD ABC_6TM_TAP 134 421 - -
Dere01g1864 549 Pfam ABC transporter transmembrane region 135 395 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere01g1864 549 Gene3D - 437 548 IPR027417 -
Dere01g1864 549 PANTHER ABC TRANSPORTER B FAMILY 102 531 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1864 Dere-ChrDere01 32948506 32954857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1864 187 541 Calmodulin-binding Proteins AT2G36910 25.063 1.39e-27 116