Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1848 ATGAATACGACGCCGTTCATGGATAAGCAGATAATGGATCTAACTCATGGATCGTCTCCGAGCAAGGATTTTATCGACCTGATGAGCCATCCTAAGGAGCAAGAAGAAGCAGACGCAGAAGGTGAAGCTCGCCGTAGCAGCCCCCGCCAAATCGGTGGCAATGGGATTAAGGAGGATATCATTGCCAGCTACGATTTCCAGCCGATTCGTCCAATTGGAACTTCGACTCAGTCTTCCAATCACGATTCCAACCCTAACCTCGGGGCGATTTCTAGGCCTTGGAATTCTGACTCTAAGTCCAACTCTTCCACTCCAATCATAAGAAATTACAGTTCTCTGGATTCTCTTGAACCTGCAAAAGTCATTGTAGAAAAGGATCGAAATGCCTTTGATGCTACAATTTTGTCTGAGATTGATCGAACCATGAAAAAACATACAGAGAATTTGCTCCATGTTCTGGAAGGTGTCAGTGCAAGGTTAACGCAGCTAGAAAGCAGAACCAACCATCTTGAGAATTCTGTGGATGATTTGAAAGTATCTGTTGGAAACAATCATGGTAACACTGATGGAAAAATGAGGCAGCTGGAGAATATCCTTAGAGAGGTGCAAACAGGGGTACAGTTTTTAAAAGATAAGCAAGATGTGGTGGAAGCTCAGCTGCAGCTGGCAAAGGTACAACTGTCCAAGGTGGACCGACAATCGGAAACTCAGACTAGTGTGATTACAGATCCTGTGCAGCAAGCTGCATCTGCTCCCCAGCAATCTCAACAACAGCTTCCTTCCCCTGTTAATCTTCCGCAATCAATTCCTGCGGTCCCTCACCCTAATGCTCCTCCTCAACCTCTAACCCAACCGGGTTTGCCACCTCCAGTTCAACTTCCTAATCAGTTTCCTCAGAACCAAATCACTTCTGGTCCTCAGCGAGAACCATACTTCAAACCACCTCCTCAACCTCATGATGCCCCAAATCAGCAATACCAACTGCCTTTATCTCAGCAACCGCATCCTTCTCCTGGGGCACCTCCACAGCAACAATACCAACAGACCCTTCAACCCCAGTACCCTCAGTCTGCACCTCATCCACCCCAGCAACAGCCATCGCCTACACCTGTTAATCCTCCACCTCAAATACCATCTTCTCTGGGTCATCATGTGGAAGAGACATCTTTTATTCCTCCTCAGAATTACCCACCTAATGTCCGTCAGCCACCATCTCAAGCACCCAGTGGACCACCTCCCTCCCAGCAATTCTATGGGCCACCATCCCATGTATTTGAACCACTATCTAGTAGATCTGGTTCAGGTTTTTCTTCTGGATATAGTGCACCATCTGGGCCTGCTGAGCCTTATCATTATGGTGGATCACCTCAGTATGTTGCCACTTCAGGGCCAAAACCACAAATGCCTCCTCCTGCAGTGGCTCCTCCAAGTGGTGGAAGTGGTTACCCGCAGCTCCCAACTGCTCGGGTACTGCCACATGCATTGCCTACTGCTTCAGGGGCAAGTAGTGGTACAGGTTCTGCTGGAACTGGAAACAGGGTTCCCATGGATGATGTGGTTGACAAAGTGGCAAGTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGGAAGCTAACCGAGAATGGTCAATCAGTTGACCTTAATGTAGTGCTGGATAAGCTTATGAATGAAAGTGATATTCAGCCAAGAGGTTGGTATGGTCGGTAG 1713 0.4793 MNTTPFMDKQIMDLTHGSSPSKDFIDLMSHPKEQEEADAEGEARRSSPRQIGGNGIKEDIIASYDFQPIRPIGTSTQSSNHDSNPNLGAISRPWNSDSKSNSSTPIIRNYSSLDSLEPAKVIVEKDRNAFDATILSEIDRTMKKHTENLLHVLEGVSARLTQLESRTNHLENSVDDLKVSVGNNHGNTDGKMRQLENILREVQTGVQFLKDKQDVVEAQLQLAKVQLSKVDRQSETQTSVITDPVQQAASAPQQSQQQLPSPVNLPQSIPAVPHPNAPPQPLTQPGLPPPVQLPNQFPQNQITSGPQREPYFKPPPQPHDAPNQQYQLPLSQQPHPSPGAPPQQQYQQTLQPQYPQSAPHPPQQQPSPTPVNPPPQIPSSLGHHVEETSFIPPQNYPPNVRQPPSQAPSGPPPSQQFYGPPSHVFEPLSSRSGSGFSSGYSAPSGPAEPYHYGGSPQYVATSGPKPQMPPPAVAPPSGGSGYPQLPTARVLPHALPTASGASSGTGSAGTGNRVPMDDVVDKVASMGFPRDHVRATVRKLTENGQSVDLNVVLDKLMNESDIQPRGWYGR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1848 570 MobiDBLite consensus disorder prediction 427 441 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 1 17 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 396 418 - -
Dere01g1848 570 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 568 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 463 477 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 266 295 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 26 45 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 229 265 - -
Dere01g1848 570 Pfam UBA-like domain (DUF1421) 517 560 IPR010820 -
Dere01g1848 570 Coils Coil 192 212 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 70 107 - -
Dere01g1848 570 SUPERFAMILY Tropomyosin 147 247 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 1 55 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 355 377 - -
Dere01g1848 570 MobiDBLite consensus disorder prediction 229 515 - -
Dere01g1848 570 Coils Coil 153 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1848 Dere-ChrDere01 32730443 32735722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1848 138 559 Trihelix Transcription Factor Family AT3G01560 47.552 2.37e-79 253