Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1830 ATGCAACCTCACCACCACCTTCACTTCTCAACTAAGCCTTCCTTCCCACTCCCCGTCGACGCCGATCACAAAGCCACCGTCTTCCGCCCACTCTCCCTGGCCCCACCCCACATGCGTGCCTTTCATCTTGCATGGCTCAACCTCTTCTCCTGCTTCTTCTCCACCTTCTCCATCCCTCCCCTCCTCCCCGTCATCCGCAACGACCTCCACCTCACCCCCACTGACATCGGCCACGCCGGCATCGCCTCCTTCCTCGGCTCCATCTTCTCCCGCCTCCTCATGGGCCCCACCTGCGACCTCCTGGGCCCCCGCATGGCCTCCGGCACCCTCTCCCTCCTCACCGCACCTGTCATCCTCTCCACCGCTTTCGTGTCCACACCCCAATCCTTCATCGTCATTCGCTTCCTCGTTGGATTTTCGCTCGCCAACTTCGTGTCCAACCAGTTCTGGATGAGCTCCATGTTCTCCCCTTCCATAGTAGGCCTAGCTAACGGTGTAGCAGCCGGGTGGGCTAACGTGGGTTCGGGTGTGACCCAGCTGGTTATGCCTCTGGTTTACGCTCTCATAATGCACTTCAACATACCTTCTTCTACTGCTTGGAGGGTCGCGTTCATTGTTCCTGCAATTTTCCAATTCATCACGGGAATCTTGGTCTTGACTCTTGGACAAGACCTGCCTTCGGGTAGATATGCGCGTACCGAGAAGGCTAAAAAAGAGAAAATATTCAAAATTCTAGTTCATGGGTTGTCCAATTATAGAGGGTGGATTCTGGGTTTGCTGTATGGGTTCAGTTTCGGGGTGGAGCTTACCACAGATAACATCATAGCGCAGTACTTCTATGACAGGTTTAACGTGAATATCCAAGTGGCCGGGACGATTGCGGCGAGTTTTGGGATGGCGAATTTGTTTTCGCGGCCAATAGGAGGGATAATATCTGATGAGATGGGGAAGAGGTTTGGTATGAGAGGGAGATTGTGGGGTTTGTGGATGGTGCAGACAGTGGCTGGAATTCTGTGTGTGTTGCTTGGACGAGTTAACTCGCTGTGGAGTTCTATCCTTGTCATGTGTGGCTTCTCCATATTTGTTCAGGCAGCTTCTGGCCTCACGTTTGGCGTTGTTCCTTTCGTTTCCCAGAGATCGCTTGGAGTAATTTCAGGAATGACGGGCAGCGGAGGGACTCTTGGGGCTGTGGTGACTCAAACACTCTTGTTTTCAGGGGCCCACTTCTCAAAGCAAATAAGCATATCTCTAATGGGGATTATGATGATAGTGTGCACTCTTCCTGTGACCTTGATGTACTTCCCTCAATGGGGAGGCATGTTGTGTGGCCCTTCCTCAGATCACCTTTCACCTGAAGAAAATTATCGCCTGCTAGAATAA 1380 0.5254 MQPHHHLHFSTKPSFPLPVDADHKATVFRPLSLAPPHMRAFHLAWLNLFSCFFSTFSIPPLLPVIRNDLHLTPTDIGHAGIASFLGSIFSRLLMGPTCDLLGPRMASGTLSLLTAPVILSTAFVSTPQSFIVIRFLVGFSLANFVSNQFWMSSMFSPSIVGLANGVAAGWANVGSGVTQLVMPLVYALIMHFNIPSSTAWRVAFIVPAIFQFITGILVLTLGQDLPSGRYARTEKAKKEKIFKILVHGLSNYRGWILGLLYGFSFGVELTTDNIIAQYFYDRFNVNIQVAGTIAASFGMANLFSRPIGGIISDEMGKRFGMRGRLWGLWMVQTVAGILCVLLGRVNSLWSSILVMCGFSIFVQAASGLTFGVVPFVSQRSLGVISGMTGSGGTLGAVVTQTLLFSGAHFSKQISISLMGIMMIVCTLPVTLMYFPQWGGMLCGPSSDHLSPEENYRLLE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1830 459 Pfam Major Facilitator Superfamily 45 398 IPR011701 GO:0022857|GO:0055085
Dere01g1830 459 CDD MFS_NRT2_like 41 431 IPR044772 GO:0015112
Dere01g1830 459 Gene3D MFS general substrate transporter like domains 236 438 IPR036259 -
Dere01g1830 459 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 12 455 IPR044772 GO:0015112
Dere01g1830 459 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 437 IPR020846 GO:0022857
Dere01g1830 459 FunFam Nitrate transporter 2.1 238 439 - -
Dere01g1830 459 FunFam High affinity nitrate transporter 2.5 33 229 - -
Dere01g1830 459 SUPERFAMILY MFS general substrate transporter 18 433 IPR036259 -
Dere01g1830 459 Gene3D MFS general substrate transporter like domains 36 231 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1830 Dere-ChrDere01 32182152 32184179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1830 1 444 Inorganic Solute Cotransporters AT5G14570 65.086 0.0 603