Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1827 ATGATTTCCATACATGGCTCAAATCCATCGTCAAGCTTTCTCATTCTCATCGCTTTCCTCTTCCTATCATTCCCCCACTCTCTCCTCTCCGATCCCCGAATCTCCGAAGCAGGACTCTTGTGCGGCACTGCCAAAGCCTCGCCAAAATCCAATTACATCCCAAGCTTCGTAAAGGAAATGGAGTCTCTTTCCCAGACAGTCACTACCCAGAACTGGGCCTCTCACTCTGTAAACTTCTCCAACCCTCCCATCTATGGCTTCGCTCAATGCTTTCAGGACCTTACCCACACCGATTGCCTTCTCTGTTATGCTGCTAGCCGTACCAAGCTCCCTCGCTGCCTCCCCTCTGTCTCTGCTCGTATCTACCTCGATGGCTGCTTCCTGCGGTACGATAACTACAGTTTCTACTCCGAAGATGTTGACCCTTTGAGGGATACGGTGAATTGTAGTTCCAAATTTGGTGTGGTGGAGGATGAAATCGAGAGGTCGGAGTTTGAGAAGAGTGTGGGAGAAGTGGTTGAGAATGTGAATAGGATTGCTGCTGGAAAGGGTTTGGGGTTTGGTTTGGGAGAGTTTAATCGGGTTTATGCCTTGGCTCAGTGTTGGAAGACTGTGGGGAGTGATGGGTGTGGGAAATGCTTGAGGAAAGCGGGAAGGGAGGTGAGAGGGTGCTTGCCTAAGAGGGAAGGAAGGGCATTGAATGCTGGGTGCTATTTGAGGTACTCATCTGAGAAGTTCTACAGTGAAAGAGGTGAAGAAGATGCTGGAAAAGGGTCTTTTAGAAGAGGAGTCATCATAGCAACGGTGTTAGCTGCGGCTGCAGTTGTAATGCTCTCTCTCTCTGCCTCTTATGCAGCCTTCTCAAGATTATCGAAGCTGAATAAAGAACGCGAAAGTCTTGGTCAGATTTCCATTTCCATAAGCAAATCAAGTTTGAATTTCAAATACGAAACTCTGGAGAAGGCCACAGATTATTTCAACTCTTCAAGAAAAATTGGCCAAGGAGGAGCTGGTTCTGTGTTCAAAGGGACTCTCTCAAATGGGAAAGTTGTAGCTGTAAAGAGATTAGTCTTCAATACCAGGCAATGGGTTGACGAATTCTTCAATGAAGTAAATTTGATAAGCGGAATTGAGCACAAGAACCTCGTAAAACTCTTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTCCTTGTATACGAGTACCTACCCAACAAGAGCTTGGATCAATTCATCTTTGAAAAGAACAAAACTCAGATTCTAAAGTGGAAGCAGCGTCTTGATATAATTGTTGGAATAGCAGAGGGGCTTGCATATCTTCACGCAGGATCTGACATGAGAATAATCCATAGAGACATCAAAAGTAGCAACATTCTTCTGGACGAGGATCTCACTCCTAAGATTGCAGACTTTGGCCTTGCCCGCTGTTTTGCTGCTGACAAAACGCATCTTAGTACCGGAATTGCTGGCACACTAGGGTATATGGCTCCTGAGTATCTTATTCGGGGACAACTAACAGATAAGGCCGATGTCTATAGTTTTGGAGTACTGGTTCTAGAGATTGTATGTGGCAGGAGGAACAATGTTTTCAGAGAAGACAATGGTTCCCTTCTACAAACAATTTGGAGACTTTACCGACCAAACCGATTGGCTGAAGCAATAGATCCTTGCTTAGTTGATGATTTTCCTGTAGCAGAGTCATTAAGGGTGCTTCGAATTGGCCTGCTATGCACACAAGCTTCTGCTTCACTGAGACCATCCATGGAGGAAGTTGTTTACCTGTTAAGTAATTCAAATGTGGACGTTCCTGTACCTAATCAACCACCTTTTTTGAACCCTGGATTGCTAAACTCAGACAGCTCCATTAGATCTTACAGCACAAACAGCTTTGTTTCAAATACATTGAAGAAGATTGGAATATCCTATGGCTCCTCGGAGGCCTCTAGTTCTCGCAGTTCTGAAGGGCCATCAAGAAGTGAAGAACCTATTATACAAGCTTGA 1998 0.4525 MISIHGSNPSSSFLILIAFLFLSFPHSLLSDPRISEAGLLCGTAKASPKSNYIPSFVKEMESLSQTVTTQNWASHSVNFSNPPIYGFAQCFQDLTHTDCLLCYAASRTKLPRCLPSVSARIYLDGCFLRYDNYSFYSEDVDPLRDTVNCSSKFGVVEDEIERSEFEKSVGEVVENVNRIAAGKGLGFGLGEFNRVYALAQCWKTVGSDGCGKCLRKAGREVRGCLPKREGRALNAGCYLRYSSEKFYSERGEEDAGKGSFRRGVIIATVLAAAAVVMLSLSASYAAFSRLSKLNKERESLGQISISISKSSLNFKYETLEKATDYFNSSRKIGQGGAGSVFKGTLSNGKVVAVKRLVFNTRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFIFEKNKTQILKWKQRLDIIVGIAEGLAYLHAGSDMRIIHRDIKSSNILLDEDLTPKIADFGLARCFAADKTHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEIVCGRRNNVFREDNGSLLQTIWRLYRPNRLAEAIDPCLVDDFPVAESLRVLRIGLLCTQASASLRPSMEEVVYLLSNSNVDVPVPNQPPFLNPGLLNSDSSIRSYSTNSFVSNTLKKIGISYGSSEASSSRSSEGPSRSEEPIIQA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1827 665 ProSiteProfiles Gnk2-homologous domain profile. 147 246 IPR002902 -
Dere01g1827 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Dere01g1827 665 FunFam Cysteine-rich receptor-like protein kinase 2 402 602 - -
Dere01g1827 665 FunFam Cysteine-rich receptor-like protein kinase 2 292 401 - -
Dere01g1827 665 Pfam Salt stress response/antifungal 45 133 IPR002902 -
Dere01g1827 665 Pfam Salt stress response/antifungal 161 243 IPR002902 -
Dere01g1827 665 SUPERFAMILY Protein kinase-like (PK-like) 310 622 IPR011009 -
Dere01g1827 665 MobiDBLite consensus disorder prediction 643 659 - -
Dere01g1827 665 ProSiteProfiles Protein kinase domain profile. 326 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1827 665 FunFam Cysteine-rich receptor-like protein kinase 3 148 246 - -
Dere01g1827 665 Gene3D Phosphorylase Kinase; domain 1 286 401 - -
Dere01g1827 665 Gene3D Transferase(Phosphotransferase) domain 1 402 602 - -
Dere01g1827 665 Pfam Protein kinase domain 327 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1827 665 Gene3D - 37 135 IPR038408 -
Dere01g1827 665 Gene3D - 155 246 IPR038408 -
Dere01g1827 665 CDD STKc_IRAK 332 594 - -
Dere01g1827 665 ProSiteProfiles Gnk2-homologous domain profile. 34 135 IPR002902 -
Dere01g1827 665 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 624 - -
Dere01g1827 665 MobiDBLite consensus disorder prediction 643 665 - -
Dere01g1827 665 SMART serkin_6 326 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1827 665 FunFam Cysteine-rich receptor-like protein kinase 2 34 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1827 Dere-ChrDere01 32126716 32129775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1827 14 491 Receptor kinase-like Gene Family AT5G40380 57.411 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere01g1827 Pkinase 1.9e-45 CL0016