Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1820 ATGCGGAATATTTCGGTGTTACTCTCTTCTTTGACCCCATGTATAGTCCCTCTGCCTCCAAACCCCGTAGCTAAGCTCCCTCGACTTTCGCGCACATTGTCTTCTTTGGCCATCAACGATTTCCATTTTTTCTCTGGACTTTCATGCCGGGAAGCTTCATACCCACCTGCTTATTTGTGCGTTAGTGCTCAAAAACCAGTTTCATTTCTCATTTCAAGGCGGAAAATTTTAACCTCTAAGGTCGGCGCTGCTTTGGTGCCTGAGGCTAATAGTGATGAGCCCAGCAAACCCAATGCTCTGATTCGGACTCTGCAGCTTGGGGCCATGTTCGGAACTTGGTATGTCTTGAACATTTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCGACAGTTACAGCATTTCAGTTTGGTTACACTACGCTGATGATTACTTTGATCTGGACTTTTAATCTCTATCCCAAGCCAAAGATCAGTCGGTCACAGCTTGCAGCAATCCTTCCGCTGGCTGTTGCTCACACAATAGGTAACTTTTTGACCAACATTAGCATTGGAAAGGTTGCTGTATCTTTCACTCACACAGTCAAAGCTTTGGAGCCTCTATTCACGGTTGTTCTTTCTTCTCTGTTTCTGGGAGAGCAAGCCACTTTCTGGGTGGTTACTTCTCTTGTACCAATAGTAGGTGGAGTGGCGTTGGCATCAATGACTGAAGTTTCTTTCAATTGGATTGGGTTCTATAGTGCTATGGCATCCAACCTTATTAACCAATCGAGAAATGTACTGAGCAAAAAACTTATGGTCAATGAAGAGGTAAGTTTGGACAACGTAAACCTCTATTCAGTCATATCCATAATTTCCTTCATTCTGTCTCTCCCATTAGCCATTTCAATGGAAGGCTTCAAGTTTACTCCTTCATTCCTGCAATCTGCTGCGGGCCAAGGATTGAATGTCAGAGAGCTATGTGTGAGATCACTACTGGCTGGTTTCTGCTTCCATACTTACCAGCAGGTTTCTTATGGAATATTACAGATGGTGTCCCCCGTGAGCCACTCGGTTGGGAACTGTGTGAAGCGTGTGGTCGTCATAGTCTCCTCAGTTATCTTCTTTCACACTCCTGTCTCTCCAGCTAACACACTCGGAACGGCTGTAGCGCTTGCTGGTGTGTTCTTGTATTCGAGGGCAAAGCAGGCAAAGACAAAGACAAAGACAAAGACAGCATAA 1236 0.4466 MRNISVLLSSLTPCIVPLPPNPVAKLPRLSRTLSSLAINDFHFFSGLSCREASYPPAYLCVSAQKPVSFLISRRKILTSKVGAALVPEANSDEPSKPNALIRTLQLGAMFGTWYVLNIYFNIYNKQVLKVYPFPATVTAFQFGYTTLMITLIWTFNLYPKPKISRSQLAAILPLAVAHTIGNFLTNISIGKVAVSFTHTVKALEPLFTVVLSSLFLGEQATFWVVTSLVPIVGGVALASMTEVSFNWIGFYSAMASNLINQSRNVLSKKLMVNEEVSLDNVNLYSVISIISFILSLPLAISMEGFKFTPSFLQSAAGQGLNVRELCVRSLLAGFCFHTYQQVSYGILQMVSPVSHSVGNCVKRVVVIVSSVIFFHTPVSPANTLGTAVALAGVFLYSRAKQAKTKTKTKTA 411
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1820 411 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
Dere01g1820 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 323 400 - -
Dere01g1820 411 Pfam Triose-phosphate Transporter family 104 397 IPR004853 -
Dere01g1820 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 241 - -
Dere01g1820 411 PANTHER SOLUTE CARRIER FAMILY 35 105 403 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g1820 Dere-ChrDere01 32079574 32083195 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1820 80 411 Antiporters AT3G01550 62.651 2.53e-140 404