Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1818 ATGATCCTTATCGAAGCCCACATGGAAGTAGGGAACAAGTGGGTAAAAATCGCACGCAGGCTTCCTGGAAGAACTGAAAATACAATCAAGAACCATTGGAACGCCACAAAGCGTGGCATTCACACCAAGAACAAGAGGAGCAGACCATCCAAATCGAGGCCTTCACTTCTTCAGGACTACATCAGGAACGTCACTTCAGCCCAAGTAGCTTCAACACAACCGGAGATCAAAGCAGAACAACCTGACGATGAGGCCTACAACAACAACATCATTAGCAGCAGCAACAACAACAACGCTGTCAGAATTCGCTACCTTAGCACCTCCGACGGCAACACTAGCTCTGGTGAATGGAACTTTGAGGGCTGTGAGCAAGAGGATGAGGTGGTGCCGCCTGAAGGAAAGGAGGTGAAGAAGGTCACTGATATTGTTACTATCAATAATAGTGGGGAAGAGGAGGTGGCAATGGAAATGAACAGCTTGGTGCATGAGGAAGACACGAAGAAGGGGATGGAGGTAATGGAGCTGATATCGGGAAAGCACTAA 543 0.4807 MILIEAHMEVGNKWVKIARRLPGRTENTIKNHWNATKRGIHTKNKRSRPSKSRPSLLQDYIRNVTSAQVASTQPEIKAEQPDDEAYNNNIISSSNNNNAVRIRYLSTSDGNTSSGEWNFEGCEQEDEVVPPEGKEVKKVTDIVTINNSGEEEVAMEMNSLVHEEDTKKGMEVMELISGKH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1818 180 CDD SANT 2 37 IPR001005 -
Dere01g1818 180 Gene3D - 1 59 - -
Dere01g1818 180 SMART sant 1 39 IPR001005 -
Dere01g1818 180 ProSiteProfiles Myb-like domain profile. 1 37 IPR001005 -
Dere01g1818 180 Pfam Myb-like DNA-binding domain 2 34 IPR001005 -
Dere01g1818 180 SUPERFAMILY Homeodomain-like 2 44 IPR009057 -
Dere01g1818 180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 41 IPR017930 -
Dere01g1818 180 PANTHER MYB PROTEIN-RELATED 2 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1818 Dere-ChrDere01 32058970 32059512 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1818 2 74 MYB Transcription Factor Family AT4G18770 59.459 1.08e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere01g1818 Myb_DNA-binding 7.2e-10 CL0123