Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1810 ATGATTCTGATCGAAGCGCATAAGAAATTAGGGAACAAATGGGCAGAAATCGCACGCAGGCTTCCTGGAAGAACTGATAATACTATTAAGAACCACTGGAATGCCACAAAGCGTCGCCAAAATGCCAAGAAACAGATGAACAAGGGTTCCCCCTCCAGGCCTTCACTTCTTCAAGACTACATCAAGCAAGTCACTTCGGCCCAAGTAGCTGCAAAGCAGTGGGAGATCAAGGTCGAACAAGTTGATGATGATGAGCCCCTCAACAACAACAACAACAACAACATTAGAGTTCGCTATGAAAGTGCATCGGACAATGAAGACAGTAGCTCTGATTGGGACATTGAGGTGTATGCGCATGAGGACGTGGTAGGTGATGATGAGGAAAAGGAGAATGACAAGATGATGGATAATAATAACAACAACAACAACAACAATAACAATAACAACAATAATACCAATGGTCATAATATTGGCACAGAGGAAGTTGCTGTAGAAATGAGTAATCTGGTGCGCAATGAACACATGAAAAGGGAGATTGATTTGTTGGAGATGATTTGTGGAACTAGAAAGTGCTGA 576 0.4236 MILIEAHKKLGNKWAEIARRLPGRTDNTIKNHWNATKRRQNAKKQMNKGSPSRPSLLQDYIKQVTSAQVAAKQWEIKVEQVDDDEPLNNNNNNNIRVRYESASDNEDSSSDWDIEVYAHEDVVGDDEEKENDKMMDNNNNNNNNNNNNNNNTNGHNIGTEEVAVEMSNLVRNEHMKREIDLLEMICGTRKC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1810 191 SUPERFAMILY Homeodomain-like 2 44 IPR009057 -
Dere01g1810 191 CDD SANT 2 37 IPR001005 -
Dere01g1810 191 MobiDBLite consensus disorder prediction 136 156 - -
Dere01g1810 191 SMART sant 1 39 IPR001005 -
Dere01g1810 191 PANTHER MYB PROTEIN-RELATED 2 140 - -
Dere01g1810 191 MobiDBLite consensus disorder prediction 124 156 - -
Dere01g1810 191 Pfam Myb-like DNA-binding domain 2 34 IPR001005 -
Dere01g1810 191 Gene3D - 1 53 - -
Dere01g1810 191 ProSiteProfiles Myb-like domain profile. 1 37 IPR001005 -
Dere01g1810 191 MobiDBLite consensus disorder prediction 36 55 - -
Dere01g1810 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 41 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1810 Dere-ChrDere01 31812588 31813163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1810 2 71 MYB Transcription Factor Family AT4G18770 64.286 1.66e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere01g1810 Myb_DNA-binding 1.1e-11 CL0123