Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1790 ATGGAGCACGTATCAGAAAAAAGATTTCCTCTCAATGCAAAAGATTATAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGCGCTACTGTACACAGGGCATTATGTATTCCACTCAACGAAATAGTTGCCATCAAGGTTCTTGATCTTGAAAAGTGCAACAATGATCTGGATGGCATCAGGAGAGAGGTACAAACAATGAGCTTGATTGATCATCCAAATGTTTTACGGGCTCATTGCTCTTTCACTGCTGGACACAACCTTTGGGTTGTGATGCCATACATGGCTGGGGGATCCTGCCTTCATATAATGAAATCTGACTACCCTGAAGGTTTTGAAGAACCTGTTATTGCTACATTATTGCGGGAGGTTCTCAAAGCTCTTGTCTATCTTCATGCTCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGATTGATTCTAATGGTGCAGTCAAATTAGCTGACTTTGGGGTGTCGGCATGTATGTTTGATGCTGGAGATAGGCAGCGATCGAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCCCCTGAAGTTATGCAGCAATTACATGGATATGATTTCAAGGCAGATATTTGGTCATTTGGCATAACAGCGCTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAAGTTTTACTTATGACATTACAAAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCTAAGTCGTTCAAAGAGATGGTAGGCACCTGCTTAGTGAAGGATCCAAAGAAACGGCCAACTTCGGAAAAACTTCTAAAACATGCCTTCTTTAAACATGCACGCCCCACTGAATATCTAACTCGCACCATTCTAGATGGCCTTGCTCCTCTAGGAGATCGTTTTAGGATGCTAAAGGCAAAAGAGGCTGATTTATTGGTTCAGAATAAGGCTCTTTATGAGGATAAAGAACAACTATCGCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTCAACCTGGAGGATTTAAAAAGTCAAGCTGCACTGATTCAAGATGATGACATGCCAAATGCGGAAGGGCCAGATATAGATAAGAAGCTTAAAAACAGGTCAGATGATAATGGGGTTCCAGCAGAAGGATTATCAGCTGTAACAACTAACACTAACCATGCAGATGCTACACCCACACTTGATAAAGAGGATGGGTTCAGTGATCTTCAAGATTTGGAGAGTTCACTTGCTTCATTTCCAATTAAACCTCTTCAAGCACTTAAAGGTTGTTTTGATGTTTGTGAGGATGATGCAAATAACACTAGTTTGAGGGATTTGGATCGGGATTATGGAAGAGATGAGAATGGAAGTTCTGGGCTTAGTTCATTGCCACAAAATGCTATAACCAAGCAAAAAAAGTATTTAAGTGGTTCTCTGCTACCTGATAATTTTCTCGCTCCTAAAAAGGTTGTTGCTGATGGGGACAGGGATTATTTGCAAGCAAAATATTATTCTGACCGGAATCATAGTGGTCCATTGTTATATCATCAGAAAAGAGAGACCAACAGCCTTTCATCCCTGGATGATGCATCAGAAGGAGCAGTTATCCAGCGCAAAGGGCGGTTCAAGATTACATCGGCTGATCAGAGTCCCAAGGGTCCTCCAAACTGCACTTCTGGCCTGGTTTCTGGAGGTTCTCTTGGTGCACCAAATCAGAATTCTACAGCCTCTATTCTTCCATCACTGCAGTTCATTTTGCAGCAGAACAGTTTGCAGAGGGAAGAAATTATTAAATTGATTAAGTATGTGGAGCAATCTTGTGGCAAGAATACAGAATCAGCAGAGGTAGGGATAGTTGATCTTTTACAGGTACCAACTGCAACAAGTAGGGAGAGAGAGCTGCATGCACAGGTGATTCAACTACAACAGAGCATTGGGAGTCTTGTTGAGGAGTTGCAAAGACAAAGAATGAAAAATGCTCAGCTAGAGAAGCAGCTGAACTCTATGATTAACAGAGTGGAAGAGTGA 2022 0.4149 MEHVSEKRFPLNAKDYKLYEEVGEGVSATVHRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSDYPEGFEEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSNGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVGTCLVKDPKKRPTSEKLLKHAFFKHARPTEYLTRTILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDMPNAEGPDIDKKLKNRSDDNGVPAEGLSAVTTNTNHADATPTLDKEDGFSDLQDLESSLASFPIKPLQALKGCFDVCEDDANNTSLRDLDRDYGRDENGSSGLSSLPQNAITKQKKYLSGSLLPDNFLAPKKVVADGDRDYLQAKYYSDRNHSGPLLYHQKRETNSLSSLDDASEGAVIQRKGRFKITSADQSPKGPPNCTSGLVSGGSLGAPNQNSTASILPSLQFILQQNSLQREEIIKLIKYVEQSCGKNTESAEVGIVDLLQVPTATSRERELHAQVIQLQQSIGSLVEELQRQRMKNAQLEKQLNSMINRVEE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1790 673 Gene3D Transferase(Phosphotransferase) domain 1 97 310 - -
Dere01g1790 673 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Dere01g1790 673 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1790 673 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 654 IPR047173 GO:0043539
Dere01g1790 673 MobiDBLite consensus disorder prediction 540 564 - -
Dere01g1790 673 MobiDBLite consensus disorder prediction 359 374 - -
Dere01g1790 673 SUPERFAMILY Protein kinase-like (PK-like) 13 304 IPR011009 -
Dere01g1790 673 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1790 673 Coils Coil 643 670 - -
Dere01g1790 673 MobiDBLite consensus disorder prediction 351 403 - -
Dere01g1790 673 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1790 673 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Dere01g1790 673 MobiDBLite consensus disorder prediction 440 461 - -
Dere01g1790 673 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Dere01g1790 673 MobiDBLite consensus disorder prediction 547 564 - -
Dere01g1790 673 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Dere01g1790 673 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1790 Dere-ChrDere01 31619054 31628991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1790 1 670 MAP Kinase Kinase Kinase Kinase AT5G14720 67.925 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Dere01g1790 Pkinase 3.5e-58 CL0016