Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1787 ATGCCACAAATCCTCCATCCAAGAGAAGCTGAATTGAGAGAAAAATGGATAAGTTTCACTACCGTGATTCTGATATCGTTTATTGGCTCAGTTATTTTTGGCAATGGAACTAAAAGGGATATTACTGCTGGCGGGAACGTAAAATGGTATCTTCGTCCAGAGAATACAACAGTGTCTTATGACCCTGCAAGGGCAGCACTTACTGCTATTCTTCGTTTTTTGACTGCTCTTATGTTGTCAGCTCGTGCTTGCACATCTAATTTAAATGAAGAACTTGGTGAGGTTGATACTATATTGTCTGACAAAACGGGCACTTTGACATGTAACTCTATGAAGCTTATGAAATGGTCCATAGCAAAGACTCCATATGGTCATGGTATTATAGAAATGGAGAGGACACTTGCAAGGAGAGACAGGGATAGGGAATCTATGGCTGATGATGAACAAATAATGATGGGCAATGGATTAATGAACCTTATTCGAATATCATACAGAATTCTAGATGTGGATGAAGAATCAAGTGAAATTTCCTATGAAGTTGAGTCACCAGATGAAGCAGCTTTTGTCATAGTAGCAAGGGGAATTGGTTTTGAGCATTGTACAAGGACACAAACAAGCATATCATTGCATGAATTAGATTACATGAGTGCAAAAAAGGATGACAGAGTATATAAGCTTCTACATGTCTTGGAGTTCAGCAGCTCTCGCAAAACAATTTCAGTTATTGTTATTGAATGTATTAATAAGCTTGCCCAGCCTGGAATCAAATTATGGGTATTAACTAAGGACAAAATAGAAACTGCTGTCAACATAGGGCATGACATGAAACAGATAGTGATCACTCTTGATTCACCAAAAGTCATATCCTTTGAAAGACAAGGGGATAAGGAAGCTCTAGCAAAGTCTTCACCCAAACAAAAAGATCGTTTAAAGGCATATGCCTCTTTCTCTAGTCAACCTGCATACAACAATTGGTACATTTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATTGCTCTTGGTGTTTTTGATAAGGATGTTTTTGCTCAACTTTGCCTAAAGTTAGCTGGAAGTTTGAGGAATGGTGTACTAAACAAACTTTCCATTTACAGTTTCCCTTCCTATATCTGGAGGGAGCAGAGGGCATCCTTTTCAACTGGCCCTAGATTATCAGCTGAATGCTCAATGGAGTAA 1200 0.3842 MPQILHPREAELREKWISFTTVILISFIGSVIFGNGTKRDITAGGNVKWYLRPENTTVSYDPARAALTAILRFLTALMLSARACTSNLNEELGEVDTILSDKTGTLTCNSMKLMKWSIAKTPYGHGIIEMERTLARRDRDRESMADDEQIMMGNGLMNLIRISYRILDVDEESSEISYEVESPDEAAFVIVARGIGFEHCTRTQTSISLHELDYMSAKKDDRVYKLLHVLEFSSSRKTISVIVIECINKLAQPGIKLWVLTKDKIETAVNIGHDMKQIVITLDSPKVISFERQGDKEALAKSSPKQKDRLKAYASFSSQPAYNNWYISFYNVFFTSLPVIALGVFDKDVFAQLCLKLAGSLRNGVLNKLSIYSFPSYIWREQRASFSTGPRLSAECSME 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1787 399 Gene3D - 66 95 - -
Dere01g1787 399 Gene3D - 96 108 IPR023214 -
Dere01g1787 399 Gene3D - 234 342 IPR023214 -
Dere01g1787 399 ProSitePatterns E1-E2 ATPases phosphorylation site. 101 107 IPR018303 -
Dere01g1787 399 Gene3D - 109 133 IPR023299 GO:0000166
Dere01g1787 399 Pfam Phospholipid-translocating P-type ATPase C-terminal 312 357 IPR032630 -
Dere01g1787 399 Pfam haloacid dehalogenase-like hydrolase 95 309 - -
Dere01g1787 399 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 312 364 - -
Dere01g1787 399 SUPERFAMILY HAD-like 87 275 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1787 Dere-ChrDere01 31594820 31603129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1787 311 369 Primary Pumps ATPases AT3G27870 69.492 3.52e-19 88.2