Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1777 ATGAGGATCTCATATCATTCGGTTCACGAACCCACATGCGATATTTGTGGGAAACACTGCAGATATCTTGACTCTCTAAGGGAACACCTTATAGGTCCATTGCCAAGACAGGGATGCAGAGATATCTTTGCCAATCGAGGATGCAAGTTTTGCTTGGAGGGACTCATTGGTCGTTTTTCAAACTTGGGGATTCGGGATAACTTGACTATTGGAAGAGGGCCACAAGTAGTTGCACTTGCTTGCAAAATGGTTGGCGGAGGCAGTGATGGCTCACTTGATCTCTGTGCAAGAATCTGCATAATTGATGAACAAGAAAACATCATATTCCATTCTTACGTGAAGCCTCCGATTCGAGTCACTAATTATAGGTATGAGACAACAGGTATTCGACCAGAATACTTAAGCGATGCAATGCCAATGAGACAAGTGCAGAGGAAGGTTCAGGACTTTCTCTGCAATGGAGAACCCATGTGGAAGATTCGACCAAAGTGTGGGAAAGCCAGGATTCTTGTAGGTCATGGTTTAGATCATGACCTAGAGAGTTTACAAGTGGAATATCGAGCAGAAATGATGAGGGACACATCAAAATACCCTCCATTGATGAAAACGAGCAAGCTCAGCAACTCACTGAAGTACTTGACACAAACGTATCTTGGGTATGACATCCAAACAGGGATTCAGGATCCTTATGAGGATTGCGTTGCAACAATGAGGCTGTACATGAGGACGAGATCCCAAGTTCACAAGAGAGAGGATTACCCTTTGGCTTCTGATCCTCAAAACAAGAACAACTTTGCTTCATGGAGGCAAAGAGAGCTTGAGAGAATGACCCCCGAACAAATGCTGGAAAGCTCCAGGTCTGACTATTACTGCTGGTGCTTGGATTCCATATAA 894 0.4418 MRISYHSVHEPTCDICGKHCRYLDSLREHLIGPLPRQGCRDIFANRGCKFCLEGLIGRFSNLGIRDNLTIGRGPQVVALACKMVGGGSDGSLDLCARICIIDEQENIIFHSYVKPPIRVTNYRYETTGIRPEYLSDAMPMRQVQRKVQDFLCNGEPMWKIRPKCGKARILVGHGLDHDLESLQVEYRAEMMRDTSKYPPLMKTSKLSNSLKYLTQTYLGYDIQTGIQDPYEDCVATMRLYMRTRSQVHKREDYPLASDPQNKNNFASWRQRELERMTPEQMLESSRSDYYCWCLDSI 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1777 297 SUPERFAMILY Ribonuclease H-like 89 246 IPR012337 -
Dere01g1777 297 Gene3D - 73 258 IPR036397 GO:0003676
Dere01g1777 297 CDD REX4_like 77 240 IPR037431 GO:0006364|GO:0008408
Dere01g1777 297 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 71 295 IPR047021 GO:0004527
Dere01g1777 297 Pfam Exonuclease 94 238 IPR013520 -
Dere01g1777 297 SMART exoiiiendus 75 249 IPR013520 -
Dere01g1777 297 FunFam RNA exonuclease 4 72 259 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g1777 Dere-ChrDere01 31509808 31511821 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1777 1 297 C2H2 Transcription Factor Family AT5G40310 69.040 2.21e-168 469