Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1769 ATGGCACCATCTCACATTAAGGCTTGGGTCTACTCCCAATATGGGAAATCTGCTGATGTTCTCAAGTTTGATTCTAACCTGCCTTTACCCCAACCCAAGGAAGACCAGGTTCTCATCAAAGTCCTCGCTGCTGCCCTTAATCCCATTGACTACAAGAGAATGGCTGGGTATTTCAGGGTCTCTGACTCCCCTTTACCTACTGCACCTGGATATGATGTTGCTGGGATAGTGGTCAAAGTGGGAAATCAAGTGAAGAAATTTAAGGTTGGGGATGAAGTGTATGGTGATATCAATGAGCATGGTTTGGATCACCCTAAGGTCATTGGGTCCTTGGCGGAGTATACTACTGCAGAAGAGAAAGTTTTGGCCCACAAACCACCAAATCTGAGCTTCCAAGAGGCTGCTAGCATTCCTTTAGCCATTGAGACTGCTTATAATGGTCTAGAGTTTTCTGGGTTTTCTGCTGGCCAATCTATCCTTGTAATGGGAGGTGCTGGTGGAGTTGGAACCCTTGTTATTCAACTTGCCAAGCATGTTTTTGGGGCATCTAAGATAGCTGCTACTTCTAGCACTGGAAAACTGGAATTCTTGAGGAAGTTAGGAGCTGATTTGCCCATTGACTATACTAAGGAGAACTTCGAACACCTTCCAGAGAAGTTTGATGTAGTGTATGATGCAGTAGGGGAGACTGAAAATGCATTAAAGGCAGTGAAAGAAGGGGGAAAAGTGGTGACAATAGTACCTCCTGGAATTCCACCAGCTATCTATTTCGCGCTTACTTCAGATGGAGCTGTATTGGAGAAACTAAGACCCTACATTGAGAGTGGCAAGATAAAGCCAATACTGGACCCCAAGGGTCCTTTTCAATTCTCTCACGCAAAGGAAGCATTTTCCTACTTGGAAACTAACAGAGCCAAAGGAAAAGTAGTTGTCTATCCAATCCCATAA 948 0.4451 MAPSHIKAWVYSQYGKSADVLKFDSNLPLPQPKEDQVLIKVLAAALNPIDYKRMAGYFRVSDSPLPTAPGYDVAGIVVKVGNQVKKFKVGDEVYGDINEHGLDHPKVIGSLAEYTTAEEKVLAHKPPNLSFQEAASIPLAIETAYNGLEFSGFSAGQSILVMGGAGGVGTLVIQLAKHVFGASKIAATSSTGKLEFLRKLGADLPIDYTKENFEHLPEKFDVVYDAVGETENALKAVKEGGKVVTIVPPGIPPAIYFALTSDGAVLEKLRPYIESGKIKPILDPKGPFQFSHAKEAFSYLETNRAKGKVVVYPIP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1769 315 Pfam Zinc-binding dehydrogenase 200 311 - -
Dere01g1769 315 CDD MDR_like_2 7 311 - -
Dere01g1769 315 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 315 IPR044626 GO:0016628
Dere01g1769 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 129 281 IPR036291 -
Dere01g1769 315 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 156 177 IPR002364 GO:0008270|GO:0016491
Dere01g1769 315 SUPERFAMILY GroES-like 3 161 IPR011032 -
Dere01g1769 315 Pfam Alcohol dehydrogenase GroES-like domain 35 97 IPR013154 -
Dere01g1769 315 Gene3D - 13 311 - -
Dere01g1769 315 SMART PKS_ER_names_mod 16 311 IPR020843 GO:0016491
Dere01g1769 315 Gene3D - 148 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1769 Dere-ChrDere01 31403656 31405154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1769 34 252 Monolignol Biosynthesis Gene Families AT4G37990 24.900 1.40e-06 47.4