Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1749 ATGGCTAGTCGAATTCTGTCCTCACTGCGTTCCGTGGCTTCTTCTTCTGCCTCTGCTTCCAAACGTAGTTTGGGTCTATATAGTTGCTGGATTAGGGGTATAAGCGGGATTGATGAATCTGCTGCTGCTGCTGTTACTGCTGAGGAGCCTATCATACCACCTGTTCAAGTAGATCATACTCAGCTTCTCATTGATGGAGAATTTGTTGATGCTGCTTCAGGAAAAACTTTCCCAACCTTCGATCCTAGGACAGGAGATATAATTGCTGAAGTTGCTGAAGGTGATGCTAAAGATGTAAATCGTGCTGTCTCTGCTGCTCGGAAGGCCTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGCATAATTTTGCGCTTTGCCGATTTACTGGAAAAGCACAATGATGAAATTGCAGCACTTGAAACATGGAATAGTGGAAAAACTTTTGAACAGGCTGCAAATGTTGAAATACCTATGGTGACACGCATTTTTCGATATTATGCTGGTTGGGCAGATAAAATTCACGGTCTCACAGTTCCAGCTGATGGACCGCACCATGTCCAAACTTTGCATGAACCCATTGGCGTGGCAGGCCAAATTATTCCTTGGAATTTCCCTCTTCTAATATATTCATGGAAGGTTGGACCTGCTTTAGCATGTGGCAATACAGTTGTTCTGAAAACTGCGGAGCAGACACCTCTCTCTGCACTTTATGTCTCAAAGCTATTTCATGAGGCTGGACTTCCTCCTGGTGTTCTAAATGTTATCTCTGGCTTTGGTCCTACTGCTGGTGCAGCTCTATGTAGTCACATGAATGTTGACAAGCTTGCTTTCACAGGATCTAGTATCACCGGGAAGATTGTACTGAGACTATCTGCAGAAAGTAATTTGAAGCCAGTAACTCTGGAGCTGGGTGGAAAGTCTCCCTTCATTGTGTGCGAGGATGCTGATGTTGATGCGGCTGTGGAGGCTGCACACTCTGCTTTGTTCTTTAATCAGGGCCAATGTTGTTGTGCCGGTTCTCGGACATTTGTACATGAAAGCATATATGATGTATTTGTGGAAAAAGCAAAAGCTCGTGCTCTCAAACGCGTTGTTGGAGATCCCTTTAAAAGTGGGGTTGAGCAAGGTCCTCAGATTGATTCAATGCAATTCGAGAAGATCCTCAGATACATTCAATCAGGCATTGACAGTGGAGCTACTCTTGAATCTGGTGGTCAAAGAATTGGCTCAAAAGGTTACTACATCCAACCCACTGTCTTCTCGAATGTTCAGGACAACATGCCGATAGCAAAAGAAGAGATCTTCGGTCCAGTGCAGACTATCTTGAAATTCAAGGATCTTGAGGAGGTAATCAGAAGAGCAAATGCAACATCCTATGGGCTGGCTGCTGGAGTTTTTAGTCAGAACATAGACACTGCCAACACTTTGATGCGTGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATGTATTTGATGCAGCAATACCATTTGGTGGGTATAAGATGAGCGGGCAAGGGAGAGTAAGGGGAATATACAGCCTTAGCAACTACCTGCAAGTCAAAGCTGCTGTTACTCCTTTGAAAAATCCAGCATGGTTGTAG 1623 0.4442 MASRILSSLRSVASSSASASKRSLGLYSCWIRGISGIDESAAAAVTAEEPIIPPVQVDHTQLLIDGEFVDAASGKTFPTFDPRTGDIIAEVAEGDAKDVNRAVSAARKAFDEGPWPKMTAYERSRIILRFADLLEKHNDEIAALETWNSGKTFEQAANVEIPMVTRIFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLIYSWKVGPALACGNTVVLKTAEQTPLSALYVSKLFHEAGLPPGVLNVISGFGPTAGAALCSHMNVDKLAFTGSSITGKIVLRLSAESNLKPVTLELGGKSPFIVCEDADVDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDVFVEKAKARALKRVVGDPFKSGVEQGPQIDSMQFEKILRYIQSGIDSGATLESGGQRIGSKGYYIQPTVFSNVQDNMPIAKEEIFGPVQTILKFKDLEEVIRRANATSYGLAAGVFSQNIDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLSNYLQVKAAVTPLKNPAWL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1749 540 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 64 319 - -
Dere01g1749 540 SUPERFAMILY ALDH-like 56 533 IPR016161 GO:0016491
Dere01g1749 540 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Dere01g1749 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
Dere01g1749 540 FunFam Mitochondrial aldehyde dehydrogenase 2 312 501 - -
Dere01g1749 540 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 44 529 - -
Dere01g1749 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 315 535 IPR016163 GO:0016620
Dere01g1749 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 53 314 IPR016162 GO:0016491
Dere01g1749 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Dere01g1749 540 CDD ALDH_F2BC 57 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1749 Dere-ChrDere01 31202496 31205775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1749 1 540 Aldehyde Dehydrogenase Gene Family AT3G48000 72.274 0.0 833