Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1735 ATGTTTAATTGGCTGTCAGCTAATTTGGAACAAAAGTTTGGGAATTGCAAACGGTGTCGTTTAGAGGGTGATAAAAACGACGCCGTGGGCATTGTCCCCATCAAGCATTACCTTGGTGGAACTGGCAAATTTCTTGGCCCCAAAACCATTTTCTCTCGAATTCGCCGATTCGCGAAGCGCATCGCCCTCTCAACCTCTTTTCTCCCTCTCTCATCGCGACTTGTTCGCACAAAATCTCTGGATTTCGCTACTTTCAGGTTTCTCATCGGGTCAAGAAGGTGGAATTCGATTGGAATTGATGTTTCTTTTCAAGGAGGAAGTTGGGATCGATTCAGTATTCAAGGGAGATGGAGGGCTATGCACGTGTCGGGAGGTGAGGAGTGGAAACAGAGGCGGCACATGTGGCCAGTCCCTGCCACCGCGACGACTGTAGCTCCCGCTGCCGATTCTTCATCATCTGAATTCATATGCAAAGATGGACGCAAGATCCGTGTTGGTGATTGTGCACTTTTTAAGCCACCCCAAGATTCCCAACCTTTTATTGGAATAATTCGCAAGTTAACTTTGAAGAAAGATCCTAGTTTAGAAGTGAATTGGCTTTACCGTCCTGCTGATTTGAAGCTTGCCAAAGGGATCCAATTGGAAGCTGCCCCAAACGAGGTCTTTTACTCCTTTCACAAGAATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTATGACATTGAGAGCGAGCGTTTATGGTGGCTAACTGATAAAGTCCACATTAATGAACGACAAGAAGAAGTTGACCAGCTATTAGACAAGACGAGACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACATCAACACCATCACTGAAATCTGGATCTGATAGTATTCAAAATAGTTCTTCCTTTGGTTCACAGGGTAAGGGAAAGAAGAGAGAACGTGGTGATCAAGGATCTGATTCATCTAAAAGAGATCGGCTAATTAAAACAGAAGATGGCGATACTGGTCAATTTAGGCCAGAAAGCATGTTAAAGTCAGAGATTGCTAAAATTACTGATAATGGTGCCCTTGTGGACTTTGAAGGAGTTGAAAGACTGGTACAGCTCATGCAACCTGACAGCGCTGATAAAAAAATAGATTTGGCAGGGCGAATAATGCTTGCTGATGTAATAGCAGTCACAGATCGGTTTGACTGTCTTGGTTGGTTTGTACAGCTCAGGGGCTTGCCTGTATTGGATGAATGGCTTCAGGAGGTCCATAAGGGGAAAATTGGTGATGGTAATATGCCTAAAGAAAGTGACAAGTCTGTTGAAGAGTTGCTATTAGCTCTACTTCGTGCATTGGATAAGCTTCCTGTGAATCTTCACGCCTTACAGACATGTAATGTTGGGAAGTCTGTCAATCACTTGCGTACTCACAAGAATTCTGAAATTCAAAAGAAAGCTAGGAGTTTAGTAGACACATGGAAGAAACGTGTTGAGGCTGAGATGAATATTAGTGATTCAAAATCTGGTTCTAGCCGTGGCGTTTCTTGGCCAGCAAAGCCTGTATCTTCTGAGGCTTCTCATGTTGGAAGTAGGAAAACAGGAGGATCTGCTGAGATTGCTGCAAAGAGTTCCGCCATGCAACCATCAGCATCTAAAAACTCCCAAGCTAAGATTGGCGCAGGAGAAGCATTGTCCAAGCTCTCCCCATCTGCCAGTTCAACTAAATCAATGTCTACGTCAGTGGTCAGTAATTCAAAGGATCAAAACATTAAATCACTGGCTGGAGCTGGAACATCAGATCTACCCCTGACACCTATTAAGGAGGAAAGGAGTAGCAGTTCTAGTCAGTCTCAGAACAACAGCTTATCTTGTTCTAGTGAACATGCAAAAACTATAGGTTCTTGTAGGGAAGATGCTAGGAGCTCCACTGCCGTGTCAATTAGTGTGAGCAAAATTCCTGGTAGTGCATCGCGTCCCCGGAAAACAAGCAACGGTCTGCATGGAGCTGCTTTAACTGCAGTTCAGAAGGAGCTCCATTCTGGAAAGAACTCGAGTAGAAACTCAATGTCTGAGAAGGTGTCACCTACTCAATCAGCCCATGAAAAATCACCTGAGGTGCCTCTTGCTGAGCATGGAAATAATCAGCGGCTGATTGTCAGGTTGCCAAATGCTGGCCGCAGTCCTGCCCGGGGAGCTAGTGGGGGCTGCGAAGATCCTGCTATTCTGTGTGGCAAAGCCTCACCTCCTGGAGATAAGCATGATAATCTGGACAGAAGAGTGAAAGCTAAAACTGATGGTTCTCAGACTAATAATGTCTTGAATATGGCCATTGATGCTTGTGATGTTAATGAAACTGTGACTGGTCATGAGGAAGGTAATGGCTCACCAACAGGTGAAGGATGCAGGGCCAGTGAAGATGGTGATAAACTGGCTGAAACATTGAAAACAACTTGTTCATCTGGATTTCTTTCCAGATCAGGGCAGACTTATGATGCTTCTTTAATCTCCATAAATGCATTAATTGAAAGCTGTGCAAAATTTTCTGAGGCAAGTCCCTCTGTGTCCCCTGGAGACGATGCTGGGATGAACCTACTTGCTACTGTCGCTGCTGGTGAAATATCTAGATCAGAAAATGTGACACCGGTGGTTTCTCCTGGGAGGAAGTCTCCTGTGGCGGATGAATCGTGCTCAGGCAGTGATGATAAGTTACAATTTTCAAGTGAAGCAGTTACTCGCACTCTTGGACAATCCAAGGGTGGGGCTACTGGTGATCATGTGAACACCGTTGATTCATTGCAGTTCAAGAATGATGTAAGGCAGACTGTAGCACCAAATTTGTCTGGAGATGGTGAAGCCACACCACCTGGTTGCATAGAGAAAACTGGCGATGGTAGAAATCAAATTAACTCTTCCCCTACAGATTTGTCTCATAATGTGGAAGGTCCATGCACAAGGCCTGAAGCCAACGAGGACAGTTCTGAAACACTATCATGTGCTAAAATGGAGAATGTTGTAGAGCCTGAAGGAGTTGGTCAGTTTCATGAGCAGAGGAAATTGGAACCGCGTGGGGTTAAGAGCAGCAATAGCTCGGACTCTAAAGTAAAATCAAGGGCTTCTTCCTTTGATGAAGATCAGACGGCTGATCTTATTGAGGAGAGGAACATGAAGAATGAAGTGCCTGTTTCAGAAGGGCCTGGTGCAAGTCTAAAGGTAGAGAAGGAACTGTGTGAAAAATCACCTGAATCTTCTATAGGTGTGGGTAATGAGAACCAGATTAGTGTGGAGAAAGTGGCCGGTAGTTGCATCTCAGTGCCAAAGCCGTCTCCTCTGGCAGAAAACTACGAGTTTTGTGAGGGCGAAAATGAGAATGTTTTTATTCTGCCTTCTGCTTCTAGTAATCCTCTGATGGAATCTAAGGCTAAAAATACTGATGATGTGAAGCCATGTGAGATAGAGCATAATAAGGAAAGACAGAAGGATCTGGACTCATCAGGTCCTGCTGGTAACAATCAATGTGCTGAAGAGAATTTGGATAGAAAAGAGGTTCTTGGTCTCTGTTCTGGTTCATCAGTTCACTCTGAATCTCCAAAAAACTCTGGACAAGAGAATGAAGTGCTCAAAAGCCCTCCTGGTTTTAATTTGGACAGAGTTGCATCTGATGGTGCGGCAGAACGGCATGCATCCAGTGTTAGTGATTCACTTACTGCTGCAGGGTCAGATTCTGCTGTGAAGCTGGACTTTGATTTGAATGAAGGATTTCCTGTTGATGATGTGAGTCAAGGGGAGGTTGTGAGACAGGAAGAACCTATCACGTCATCTGCGGTCCATGTGCCTTGCCCATTGCCTTTTCCTGTTTCTTCCATGTCTGGGGGCTTCCATGCATCGATTACTGTGGCTTCTGCTGCCAAAGGGCCTGTTGTTCCACCAGAGAACCCATTGCGGAGTAAGGGGGAACTTGGATGGAAAGGGTCAGCTGCTACTAGTGCATTCCGACCAGCTGAACCCAGGAAAAACACAGAGCAGCCATTATATACAAGTGATAACAGTGCTACCAAGCAAGGCCGTCCACCTCTAGATTTTGATTTGAATGTGCCAGATCAAAGAAGTTTCGAGGATGCAGCTTCCCATGGCTCTTCAGAGACTTGTTTAGAATCTCTGCCTCGTGATCGTGGGATTGTGGGACTTGATCTTGATTTAAACAGAGTTGATGAGACTTCTGATTCTGGGTCTTTCTCTATGAGCAAACTGGATATTCCTTCTTTACCAACTAAACCTTCATTGTCTGGTGTATTATCCAACGGTGGAAATGTCTCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGGCACTGAAGCCCCAGCTCGTAGTCAGCAGATAAAAACTACGGTAGTAATGTCGTCGGCTGTTCATGGTGTAAGAACAAATAATGCTGAATATGGGAATTATTCACCATGGTTTCCTTCAGGCACCTCCTATTCTGCGATCAATGTCCCTCCACTTTTACCTGGTAGAGGAGAACAGAGTTTTGTTGCTGGTGCTGGGGCACAGCGGATTTTGGGTCCTCCAGGTAGCACTTCTTTTGGTCCTGAATTCTACAGGGGTCCAGTGCTTTCATCTTCTCCAGCTGTTGCGTATCCACCCAATACACCATTTCAGTATCCAGGATTTCCTTTTGAAACCAATTTTCCTTTGTCTTCAAATTCCTTTTCTGGCTGTTCAACAGCCTTTATGGACTCCTCAACGGCAGGTGGACTTTGCTTTCCTTCCATGCCCTCACAGCTGGTTGGGCCTGGTGGTGTTGTCTCATCCAATTATTCCCGTCCCTTTGTTATGAGTCTTCCAGGTGGTACAAGTAATGTGATACCTGAAGGCAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGAGCAGATACAGAACGGAGAGATGATAGATTACCTTCAGGTTTGAGGCAACTCTCTGTCTCAAGTTCCCAAGCCTTGATGGAGGAACAGATGAAGATGTTTCAGGTGGCAGGAGGTGTTTTGAAGAGGAAGGAACCTGATGGTGGTTGGGATGGAGCTGATAGATACAACAGCTATAAACAACCCTCTTGGCAATAG 5205 0.4523 MFNWLSANLEQKFGNCKRCRLEGDKNDAVGIVPIKHYLGGTGKFLGPKTIFSRIRRFAKRIALSTSFLPLSSRLVRTKSLDFATFRFLIGSRRWNSIGIDVSFQGGSWDRFSIQGRWRAMHVSGGEEWKQRRHMWPVPATATTVAPAADSSSSEFICKDGRKIRVGDCALFKPPQDSQPFIGIIRKLTLKKDPSLEVNWLYRPADLKLAKGIQLEAAPNEVFYSFHKNETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIESERLWWLTDKVHINERQEEVDQLLDKTRLEMHGAVQSGGRSPKPLNGPTSTPSLKSGSDSIQNSSSFGSQGKGKKRERGDQGSDSSKRDRLIKTEDGDTGQFRPESMLKSEIAKITDNGALVDFEGVERLVQLMQPDSADKKIDLAGRIMLADVIAVTDRFDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNMPKESDKSVEELLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGSSRGVSWPAKPVSSEASHVGSRKTGGSAEIAAKSSAMQPSASKNSQAKIGAGEALSKLSPSASSTKSMSTSVVSNSKDQNIKSLAGAGTSDLPLTPIKEERSSSSSQSQNNSLSCSSEHAKTIGSCREDARSSTAVSISVSKIPGSASRPRKTSNGLHGAALTAVQKELHSGKNSSRNSMSEKVSPTQSAHEKSPEVPLAEHGNNQRLIVRLPNAGRSPARGASGGCEDPAILCGKASPPGDKHDNLDRRVKAKTDGSQTNNVLNMAIDACDVNETVTGHEEGNGSPTGEGCRASEDGDKLAETLKTTCSSGFLSRSGQTYDASLISINALIESCAKFSEASPSVSPGDDAGMNLLATVAAGEISRSENVTPVVSPGRKSPVADESCSGSDDKLQFSSEAVTRTLGQSKGGATGDHVNTVDSLQFKNDVRQTVAPNLSGDGEATPPGCIEKTGDGRNQINSSPTDLSHNVEGPCTRPEANEDSSETLSCAKMENVVEPEGVGQFHEQRKLEPRGVKSSNSSDSKVKSRASSFDEDQTADLIEERNMKNEVPVSEGPGASLKVEKELCEKSPESSIGVGNENQISVEKVAGSCISVPKPSPLAENYEFCEGENENVFILPSASSNPLMESKAKNTDDVKPCEIEHNKERQKDLDSSGPAGNNQCAEENLDRKEVLGLCSGSSVHSESPKNSGQENEVLKSPPGFNLDRVASDGAAERHASSVSDSLTAAGSDSAVKLDFDLNEGFPVDDVSQGEVVRQEEPITSSAVHVPCPLPFPVSSMSGGFHASITVASAAKGPVVPPENPLRSKGELGWKGSAATSAFRPAEPRKNTEQPLYTSDNSATKQGRPPLDFDLNVPDQRSFEDAASHGSSETCLESLPRDRGIVGLDLDLNRVDETSDSGSFSMSKLDIPSLPTKPSLSGVLSNGGNVSRDFDLNNGPGLDEVGTEAPARSQQIKTTVVMSSAVHGVRTNNAEYGNYSPWFPSGTSYSAINVPPLLPGRGEQSFVAGAGAQRILGPPGSTSFGPEFYRGPVLSSSPAVAYPPNTPFQYPGFPFETNFPLSSNSFSGCSTAFMDSSTAGGLCFPSMPSQLVGPGGVVSSNYSRPFVMSLPGGTSNVIPEGRKWGSQSLDLNSGPGGADTERRDDRLPSGLRQLSVSSSQALMEEQMKMFQVAGGVLKRKEPDGGWDGADRYNSYKQPSWQ 1734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1735 1734 SMART BAH_4 161 274 IPR001025 GO:0003682
Dere01g1735 1734 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 391 527 IPR035441 -
Dere01g1735 1734 Pfam TFIIS helical bundle-like domain 474 523 IPR017923 -
Dere01g1735 1734 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 428 537 IPR035441 -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 592 621 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1654 1678 - -
Dere01g1735 1734 Gene3D - 145 381 IPR043151 -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 566 584 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 703 727 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1062 1084 - -
Dere01g1735 1734 CDD TFIIS_I 479 524 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 308 336 - -
Dere01g1735 1734 Pfam BAH domain 162 268 IPR001025 GO:0003682
Dere01g1735 1734 SMART TFS2_5 446 525 IPR003617 GO:0005634
Dere01g1735 1734 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 120 1734 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 529 740 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 529 543 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 631 688 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1365 1379 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1214 1232 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1329 1390 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1213 1262 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1033 1094 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 1711 1734 - -
Dere01g1735 1734 ProSiteProfiles BAH domain profile. 161 274 IPR001025 GO:0003682
Dere01g1735 1734 MobiDBLite consensus disorder prediction 337 368 - -
Dere01g1735 1734 ProSiteProfiles TFIIS N-terminal domain profile. 440 526 IPR017923 -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 989 1004 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 298 371 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 904 928 - -
Dere01g1735 1734 MobiDBLite consensus disorder prediction 969 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1735 Dere-ChrDere01 31083619 31090088 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dere01g1735 BAH 4.6e-09 No_clan