Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1726 ATGGCGGAAGCTACGATTCTCACGCTCTTCCTTGCAGTTGTATCACTTCTACTTGTTGAACCCTCAGAGTCCAGACTCACCCTCGACTACTACAAGCATTCGTGCCCCCAGTTCAACCAAATCATCCAAGACACTGTCACCAACAAGCAGATCACCAGCCCCACCACCGCCGGCGCCACCCTCCGCCTCTTCCTTCATGATTGCCTCCCGAACGGCTGCGATGCCTCCGTCCTGATCTCCTCCACTTTTTTCAACAAAGCAGAGCGCGACGCCGACATCAACCTCTCCCTTCCCGGCGACGGTTTCGACGCCATCGTTCGCGCCAAGACCGCTCTCGAGCTCTCCTGCCCCAACACCGTCTCCTGCGCTGACATCCTCACCGTCGCCACTCGCGACCTCGTTACCATGGTGGGCGGTCCCTACTACAATGTCTACCTTGGTCGGAGGGACGGTCGCGTCTCCAAGGCTTCAGCTATCGAAGGCCACCTTCCCAAACCGACAATGTCAATGTCGCAAATCATCGAGATCTTCGCCGCCAGAGGGTTTTCCGTCGAAGAAATGGTGGCTCTGAGTGGGGCTCACACTATCGGCTTCTCGCATTGCTCTGAAATTAGCAGCGATATCTACAATAACAGTAAGTTCTCGCAATACGATCCTCAATACAACCCTCGATTCGCGCAGGGGTTGCAGAGAGCGTGTGCCGATTACAGGAAGAATCCCACACTATCGGTGTTCAACGACATTATGACCCCCAACAAGTTCGACAACATGTACTTCCAGAACCTCCCGAAGGGTTTGGGGGTTCTGAAATCGGATCGTGGGTTATACAGCGACCCGAGAACGAGGCCGTTTGTGGAAGAGTTCGCGGCGGATCAGAACAAGTTCTTTCGGGCATTTTCACAAGCAATGCAAAAACTCAGTCTCGTTGGAGTTGATACCGGAAGAAAAGGAGAGATCAGGCGCAGGTGTGATCAGATAAATTGA 984 0.5376 MAEATILTLFLAVVSLLLVEPSESRLTLDYYKHSCPQFNQIIQDTVTNKQITSPTTAGATLRLFLHDCLPNGCDASVLISSTFFNKAERDADINLSLPGDGFDAIVRAKTALELSCPNTVSCADILTVATRDLVTMVGGPYYNVYLGRRDGRVSKASAIEGHLPKPTMSMSQIIEIFAARGFSVEEMVALSGAHTIGFSHCSEISSDIYNNSKFSQYDPQYNPRFAQGLQRACADYRKNPTLSVFNDIMTPNKFDNMYFQNLPKGLGVLKSDRGLYSDPRTRPFVEEFAADQNKFFRAFSQAMQKLSLVGVDTGRKGEIRRRCDQIN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1726 327 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Dere01g1726 327 PANTHER - 9 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Dere01g1726 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 FunFam Peroxidase 164 306 - -
Dere01g1726 327 Gene3D Peroxidase, domain 2 164 306 - -
Dere01g1726 327 FunFam Peroxidase 29 176 - -
Dere01g1726 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere01g1726 327 Gene3D - 29 327 - -
Dere01g1726 327 Pfam Peroxidase 46 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1726 Dere-ChrDere01 31012555 31013538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1726 22 327 Peroxidase AT5G40150 66.340 7.32e-158 442