Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1723 ATGGCGGGTGGAACTGAAGCTTTCCCAGATTTAGGACGACACTGCCAGCACGACCATTGCAACCAACTTGATTTCCTTCCTTTTACATGCGACGGTTGCCGACACGTCTTCTGTCTGGAACATCGATCCTACAAATCCCACAATTGCCCCAAATCCGACCATAACAGCAGGAAGGTTGTGGTGTGCGAAACATGTTCCGTGTCTATCGACACCACAGGTCACGACGAAGAAGACGAGAAGGCAGTCTTGGAGAGGCATGAGAGGTCTGGAGATTGTGACCCGAAGAAGAAAAAGAAACCCACTTGTCCTGTTCGGAGGTGCAAGGAGGTTTTGACGTTTTCTAATACAAGCACGTGCAAAACATGCCACTTGAAGGTGTGCCTCAAGCACCGTTTTCCAGCCGACCATGCTTGTAATAGGGCTACTTCATCTTCCTCGTCTGCGGTTAAAGCGATTAGTGGGCGATGGAATGATCGGTTCTTGGCTGCTATGGCGTCGAGGAACGGACAAGATTGTGCCAAGAGTTCTAAATCTCCTCGTCCTCCTACTCCTACTACATGTGTAAAAGCCTGCTGA 576 0.4965 MAGGTEAFPDLGRHCQHDHCNQLDFLPFTCDGCRHVFCLEHRSYKSHNCPKSDHNSRKVVVCETCSVSIDTTGHDEEDEKAVLERHERSGDCDPKKKKKPTCPVRRCKEVLTFSNTSTCKTCHLKVCLKHRFPADHACNRATSSSSSAVKAISGRWNDRFLAAMASRNGQDCAKSSKSPRPPTPTTCVKAC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1723 191 SUPERFAMILY AN1-like Zinc finger 5 57 IPR035896 -
Dere01g1723 191 Gene3D - 76 154 IPR035896 -
Dere01g1723 191 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Dere01g1723 191 SUPERFAMILY AN1-like Zinc finger 94 143 IPR035896 -
Dere01g1723 191 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 178 - -
Dere01g1723 191 Gene3D - 2 68 IPR035896 -
Dere01g1723 191 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Dere01g1723 191 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Dere01g1723 191 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Dere01g1723 191 FunFam AN1-type zinc finger protein 2B isoform X1 5 66 - -
Dere01g1723 191 Pfam AN1-like Zinc finger 102 141 IPR000058 GO:0008270
Dere01g1723 191 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1723 Dere-ChrDere01 30987418 30987993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1723 2 172 C2H2 Transcription Factor Family AT3G28210 66.082 2.84e-84 245