Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1720 ATGCAAGGGAAGCCTGACTTTACAGATCATTTGATGCATAAGTTGAAGCAACTCCTTGGCCAAGTTGAGGCTAATGCTATTATGGAACACGTCTTAGATAGAAGCTCATACATTAAAGTTGCTCAGAAGTTGCACGAGACCAATCCTCTGCAGGAGCCTAAACATGATTGTTATGCCCTTCAAACTTCAACTCAATGGCTTTGGTGCAGAAGTTACATGATTATATCAAAGATGTCAGTTCAATCATCTTTTGTCATAGTAGCTACAACAGTCACTGTTTATCCGCAATCGTTTCAGTTTCAGAAGTTGGTAGAAAAACAAAATATACAACTGGAGGTCATTAGAGGTGGCAGAAAAGTAATGATATCTATATTTGCCATTGTGGTTGGTAATGTCATGCCTTTGAAAATAAGAGATCAGTTAGTTAGTTCAGATGGCAATGTGGCAAGCTATGATGGAATTCTGGAAAGGCACGTGATGGCTGTTGGAGGAGATGCAACAGAATTGGGCATCCAGTTGTAG 522 0.3985 MQGKPDFTDHLMHKLKQLLGQVEANAIMEHVLDRSSYIKVAQKLHETNPLQEPKHDCYALQTSTQWLWCRSYMIISKMSVQSSFVIVATTVTVYPQSFQFQKLVEKQNIQLEVIRGGRKVMISIFAIVVGNVMPLKIRDQLVSSDGNVASYDGILERHVMAVGGDATELGIQL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1720 173 Gene3D Fumarase/aspartase (Central domain) 1 67 - -
Dere01g1720 173 PANTHER HISTIDINE AMMONIA-LYASE 1 67 IPR001106 -
Dere01g1720 173 SUPERFAMILY L-aspartase-like 1 67 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1720 Dere-ChrDere01 30977448 30978177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1720 1 67 Monolignol Biosynthesis Gene Families AT2G37040 70.149 5.61e-28 107