Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1705 ATGTCTTCCTCTATTCCTCAAGAATCTGAATCCATCCCACAGATCTACTGCCGGAAAGACAAGTCTCTCGGATTACTTTGCTCCAACTTCTTGAAGCTGTATAATCGCGAAGGTATTGGGACGATTGGACTTGACGAAGCTGCTGCCCGACTAGGTTTCCTTGTTTATCCGCTTTTGTTCCCACTTGTTTCGGTTTTTTGCTTACTTGCGTTTTGTTTGGCTGCTGAGATATTGCAAGATAGAGAACATCGAGTTCAGCGTCGCCGCATGTATGATGTAGTCAACATTTTGGAGAGCGTTGGAATTGTAGCAAGGAAGGGGAAAAACCTATACTTATGGAAAGGTTTCAAAGAAATTCCTCGAGCTTTGAACGAGCTGAAGGAAGAGGGTATGAGAGAAAAATTTGATGCAGTCCGCTGCAGTTCAACTGAAGCATTGAAGAACAAAGAAAACGGTGGTTCTGAAACTGACAGCGAGGACAATCCTTTGGCAACGGCATCATCCAAAACTGACAGCTGCAGAAGAGACAAATCTCTAGCCCTTTTGACTGAGAATTTTATAAAGCTCTTCCTCTGTTCAGAGGTTGAAATTATCTTGCTTGAAGATGCTGCAAAGATAATGCCAGGCGATTCCCAGAATTCGACTGCCTTGAGAACAAAAGTCAGACGTCTATATGACATAGCAAATGTCCTTTCCTCCATCAATCTGATTGAGAAGACAAATCATCCTGAGAATAGGAAAACAGCATATAGGTGGTTGGGAGGGAAAGCCAGCAGAGGATCTGATGGCACTTTGGATCAGAGTGCATCCAAGAAGAGAGTGTTTGGAACTGAAATTACAAATTATAGTGTAAAAAGAAGTAAAACAGATTCTTTAACGGATCCTCAGTTGCATGAAAAGAACATGCCAATGTATAAAAGACAAGATGAGTTGGAAAATGAATGCAAAGGTAAAACTCCGGAGCATCCATATAAAAGCAGTTCAAAGGCCATAGACTTCGGCCCTTTTGCTCCTGTCAAGCTTAGAAGAGAAGATCCGGACAACAGAAATACGAGACGAGTTCATGACATGCAGGCTATGAGTTCTAAATATCGCCCTGAATATCACAACCAAGCTCTGGGCGACCTCTTTGCTCATTACATGGATGCGTGGAAGTCATGGTTTGTTGAAGCAGCTGCGCAGCAACAGATATCTTGA 1197 0.4269 MSSSIPQESESIPQIYCRKDKSLGLLCSNFLKLYNREGIGTIGLDEAAARLGFLVYPLLFPLVSVFCLLAFCLAAEILQDREHRVQRRRMYDVVNILESVGIVARKGKNLYLWKGFKEIPRALNELKEEGMREKFDAVRCSSTEALKNKENGGSETDSEDNPLATASSKTDSCRRDKSLALLTENFIKLFLCSEVEIILLEDAAKIMPGDSQNSTALRTKVRRLYDIANVLSSINLIEKTNHPENRKTAYRWLGGKASRGSDGTLDQSASKKRVFGTEITNYSVKRSKTDSLTDPQLHEKNMPMYKRQDELENECKGKTPEHPYKSSSKAIDFGPFAPVKLRREDPDNRNTRRVHDMQAMSSKYRPEYHNQALGDLFAHYMDAWKSWFVEAAAQQQIS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1705 398 FunFam E2F transcription factor-like E2FE 168 256 - -
Dere01g1705 398 SMART E2F_TDP_2 18 115 IPR003316 GO:0005667|GO:0006355
Dere01g1705 398 SMART E2F_TDP_2 174 254 IPR003316 GO:0005667|GO:0006355
Dere01g1705 398 Pfam E2F/DP family winged-helix DNA-binding domain 19 115 IPR003316 GO:0005667|GO:0006355
Dere01g1705 398 Pfam E2F/DP family winged-helix DNA-binding domain 176 254 IPR003316 GO:0005667|GO:0006355
Dere01g1705 398 SUPERFAMILY "Winged helix" DNA-binding domain 176 254 IPR036390 -
Dere01g1705 398 SUPERFAMILY "Winged helix" DNA-binding domain 18 113 IPR036390 -
Dere01g1705 398 Gene3D - 169 256 IPR036388 -
Dere01g1705 398 Gene3D - 12 117 IPR036388 -
Dere01g1705 398 PANTHER TRANSCRIPTION FACTOR E2F 6 354 IPR015633 GO:0000978|GO:0006357
Dere01g1705 398 MobiDBLite consensus disorder prediction 146 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1705 Dere-ChrDere01 30790333 30793334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1705 1 391 E2F-DP Transcription Factor Family AT3G01330 44.697 2.11e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Dere01g1705 E2F_TDP 4.5e-20 CL0123