Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1697 ATGGGAAAAGCTTCGCTGGATCTCAGAAATTGCCTGCTACTACTGCTCTGCAGTTTGGTAGGTTTATGGGGTTTTGCTGCCTCGGAGGCTGAAGATGACGTGAAATGCCTCAAGGGCCTCAAAGGGTCGCTCATTGATCCTCAAGACAAGCTTCTAACGTGGCAGTTCGACAATAACACAGTCGGATTCATTTGCAGGTTCACCGGTGTCGCTTGCTGGAACGAAAAGGAGAATCGCATCATCAATCTGGACCTCAATGGTATGAACCTCTCGGGTCAGGTGCCGGAGTCTTTGAAGTACTGTGGTAATCTGAACCGACTGGATCTTGGGTCCAACGACCTTTCTGGTACGATCCCCACTGAAATTTGTAGTTGGATGCACTATTTAACAAAACTTGACTTGTCGGGAAATCGTCTTTCTGGGCCTATTCCCCCTACACTCGGGAATTGCACTTATCTGAATGAGTTAACCCTTTCCAATAATCAGCTTTCGGGTGTCATTCCTGTTGAAATTGGGAGCTTGGGTAGGCTTAAGAAGTTCTCTGTTGCTAATAATCATCTTACGGGTGCGATTCCTTCGTTTTTTAGTCGGTTTGACAAGGGAGACTTTGATGGGAACAGTGGGCTTTGTGGGGATCCTCTTGGATCCAACTGTGGAGGGTTGAGTAAGAAGAATCTTGCCATTATTATAGCTGCTGGGGTGTTTGGTGCGGCTGCTTCTTTGTTATTGGCTCTTGGGCTGTGGTGGTGGTACCATTTGAGGCTGAGTAAGCAGAAGAAAGGTTATGGAGATGGAGCAAGTGATAGTTGGGCTGTGAGATTAAGGGGTCACAAGCTTGTACAAGTCACTCTGTTTCAGAAGCCCCTTGTGAAGGTTAAACTAGGCGATTTGATGGCGTCTACCAATAATTTCGGTGCGGAAAACATTCTTAGTTCAACAAGAACTGGAACGACTTATAAAGCAGATCTTCATGATGGGTCAACACTCGCAGTCAAGCGGCTCAACACCTGTAAAATCGGGGAGAAGCAGTTTCGCATGGAGATGAATAGGCTAGGCCTACTCAAGCACCCGAATTTGGCTCCCCTTTTGGGGTTCTGTGTCGTTGAAGAGGAAAAGCTTCTGGTGTACAAGTACATGTCAAATGGAACTTTGAATTCCTTGTTGCACAAAAGCGGCAGTGCATTGGACTGGCCTATGAGATTCAGAATAGGCTTGGGGTCAGCTAGGGGTCTTGCCTGGCTGCATCATGGGTGCCATCCTCCTATTATACACCTAAATATCTGTTCCAATGTGATTCTTGTTGATGAAGATTTTGATGCTCGTTTAATGGACTTTGGACTTGCTCGGCTTATGACATCTGACTCTGATGGGTCTAGTTTTGTAAATGGAGACTTGGGGGAACTTGGCTATATAGCTCCAGAATATCCAAGTACTCGGGTTCCTTCACTGAAAGGAGATGTGTATGGATTGGGGGTTGTGCTTTTGGAGTTGGTCACTGGGCAGAAACCTCTTGAAGTAAGCAATGGAGAGGAAGAAATTAAGGGTAATTTGGTCGATTCGGTGAATATGCTTTCTAGTTCTGGTCGACTCAAGGATTGCATCGATAAGGCCATAAGTGGAAAGGGACATGATGAGGAAATTTTGCAGTTTCTGAAAATTGCATGTAACTGTGTGGTTCCTCTTCCTAAGGATAGGTTGTCCATTTACGAGGTTTATCATTCATTGAAGAGTCTGTCCAAAGACCAAAGCTTTTCCGAGCATGATGATCAATTTCCACTGATCTTTGGTAAGCCAAATGATGTGCCAGTGTAG 1812 0.4547 MGKASLDLRNCLLLLLCSLVGLWGFAASEAEDDVKCLKGLKGSLIDPQDKLLTWQFDNNTVGFICRFTGVACWNEKENRIINLDLNGMNLSGQVPESLKYCGNLNRLDLGSNDLSGTIPTEICSWMHYLTKLDLSGNRLSGPIPPTLGNCTYLNELTLSNNQLSGVIPVEIGSLGRLKKFSVANNHLTGAIPSFFSRFDKGDFDGNSGLCGDPLGSNCGGLSKKNLAIIIAAGVFGAAASLLLALGLWWWYHLRLSKQKKGYGDGASDSWAVRLRGHKLVQVTLFQKPLVKVKLGDLMASTNNFGAENILSSTRTGTTYKADLHDGSTLAVKRLNTCKIGEKQFRMEMNRLGLLKHPNLAPLLGFCVVEEEKLLVYKYMSNGTLNSLLHKSGSALDWPMRFRIGLGSARGLAWLHHGCHPPIIHLNICSNVILVDEDFDARLMDFGLARLMTSDSDGSSFVNGDLGELGYIAPEYPSTRVPSLKGDVYGLGVVLLELVTGQKPLEVSNGEEEIKGNLVDSVNMLSSSGRLKDCIDKAISGKGHDEEILQFLKIACNCVVPLPKDRLSIYEVYHSLKSLSKDQSFSEHDDQFPLIFGKPNDVPV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1697 603 ProSiteProfiles Protein kinase domain profile. 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1697 603 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 219 - -
Dere01g1697 603 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Dere01g1697 603 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 265 378 - -
Dere01g1697 603 Gene3D Ribonuclease Inhibitor 30 220 IPR032675 -
Dere01g1697 603 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Dere01g1697 603 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 80 577 - -
Dere01g1697 603 Gene3D Transferase(Phosphotransferase) domain 1 379 597 - -
Dere01g1697 603 CDD STKc_IRAK 310 578 - -
Dere01g1697 603 Pfam Protein kinase domain 315 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1697 603 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Dere01g1697 603 Gene3D Phosphorylase Kinase; domain 1 264 378 - -
Dere01g1697 603 SUPERFAMILY L domain-like 30 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1697 Dere-ChrDere01 30648140 30649951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1697 11 595 Receptor kinase-like Gene Family AT3G28450 62.606 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Dere01g1697 Pkinase 6.1e-30 CL0016