Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1692 ATGGACAAGCCACTCCAGAATGCTGACCACAATGATGCTGAATCTGTTATTTCTAGCAGCCTCCAAGACCCCAATGTTAGTGGCAGTGCTAGTATTAGTCTGTGTAGTAGCAGTGTGAGTAGTAGCAATGTGGAGACTCAAAGAAGCACTGAATCTATGACGGATTGTGAAGTCAATGAGGGCAGTTTTAGGAGCTTTTGCCCTTCAAAACCTCACAAGGGGAGCGACATTCGATGGGATGCGATACAATGCGCGAAGGGTAAAGATGGGGAATTGGGGTTGGGGCATTTCAGGCTGTTGAAGAAGCTGGGGTTTGGGGACATTGGGAGTGTGTACTTGGCTGAGCTCAGAGGGATGGGGTGCTTGTTTGCAATGAAGGTTATGGATAAGGGCATGTTGGCTGGAAGGAAGAAACTGGCCAGAGCTCAGACTGAGAGAGACATTTTGGGTTTGTTGGACCATCCTTTCCTTCCCACCCTTTATTCTCATTTTGAGACTGAGAAGTTCTCTTGCTTGCTCATGGAGTTTTGCAGTGGTGGGGATCTTCATACCCTCCGGCAGCGGCAGCAAGGCAAGCATTTCACAGAGCAAGCTGCGAGGTTTTATGCTTCTGAAGTGCTTCTTGCTCTGGAGTATCTACACATGATGGGAGTGGTGTACAGAGACCTGAAGCCTGAAAATGTACTGGTAAGAGAAGATGGCCATATCATGCTGTCTGATTTTGACTTGTCATTAAGATGCTGTGTGAGTCCCACCCTTGTTCAGTCCAGTAAAGAACCATCATGTCAGATATCGTCCTACTGCATCCAGCCTTCCTCATGCATCGATCCACCCTGCAAATTACCCGTTTGCGTGGAGCCTTCATGCTTGCAGCCCTCTTGCTTCAAGCCCCATTTTTTCAACTCGAAAAAGACCAAACCAAAGAGTGAAAAACAAAGCTTAGGGAATTCTGATTCATTCCCAGTACTCATTGCCGAGCCAACTAATGCTCGCTCTATGTCATTTGTTGGGACTCATGAATATCTAGCTCCTGAGATTATAAGAGGCGACGGTCATGGAAGTGCAGTGGACTGGTGGACATTTGGTATCTTCTTGTATGAATTATTGTTTGGGAAGACCCCATTTAAAGGGAATGGAAATCGAGAAACTTTGTTTAATGTTGTGGGTCAGAGTCTAAAGTTTCCTGAGGGATCAAGCATCAGTTTTGCTGCGAAGGATTTGATAAGGGGATTGCTTGTGAAAGACCCACAGAAGAGGCTTGGATTCAAACGAGGAGCCACTGAGATCAAACAGCATCCTTTCTTCGAGGGTATTAATTGGGCTCTCATTCGTAGCATCCATCCCCCTGAGATTCCAAAACCACTTGATCTTTCATTCTTGAATCAGACATTGAAGTCTCCTTCAGTGCCTCCAAATGACAAAGGTGCTGCTGCAACTGATTCAGACAGGTCCTCCTCAGGTCCTTACTTGGATTTTGAATTCTTTTAG 1488 0.4603 MDKPLQNADHNDAESVISSSLQDPNVSGSASISLCSSSVSSSNVETQRSTESMTDCEVNEGSFRSFCPSKPHKGSDIRWDAIQCAKGKDGELGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKGMLAGRKKLARAQTERDILGLLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHTLRQRQQGKHFTEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSSKEPSCQISSYCIQPSSCIDPPCKLPVCVEPSCLQPSCFKPHFFNSKKTKPKSEKQSLGNSDSFPVLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLFGKTPFKGNGNRETLFNVVGQSLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFEGINWALIRSIHPPEIPKPLDLSFLNQTLKSPSVPPNDKGAAATDSDRSSSGPYLDFEFF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1692 495 Gene3D Transferase(Phosphotransferase) domain 1 329 453 - -
Dere01g1692 495 Gene3D Phosphorylase Kinase; domain 1 96 176 - -
Dere01g1692 495 SUPERFAMILY Protein kinase-like (PK-like) 75 465 IPR011009 -
Dere01g1692 495 FunFam serine/threonine-protein kinase D6PK-like 181 248 - -
Dere01g1692 495 CDD STKc_phototropin_like 96 456 - -
Dere01g1692 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Dere01g1692 495 MobiDBLite consensus disorder prediction 1 56 - -
Dere01g1692 495 MobiDBLite consensus disorder prediction 466 495 - -
Dere01g1692 495 ProSiteProfiles Protein kinase domain profile. 97 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1692 495 MobiDBLite consensus disorder prediction 11 56 - -
Dere01g1692 495 FunFam serine/threonine-protein kinase D6PK-like 330 453 - -
Dere01g1692 495 Pfam Protein kinase domain 98 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1692 495 Pfam Protein kinase domain 332 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1692 495 PANTHER FLIPPASE KINASE 1-RELATED 33 456 - -
Dere01g1692 495 SMART serkin_6 97 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1692 495 FunFam Serine/threonine-protein kinase D6PK-like 95 180 - -
Dere01g1692 495 Gene3D Transferase(Phosphotransferase) domain 1 177 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1692 Dere-ChrDere01 30571485 30573570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1692 13 495 AGC Kinase Gene Family AT5G40030 75.052 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere01g1692 Pkinase 5.5e-37 CL0016