Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1681 ATGGTTGTCCCTTTCTCTCTCTTGCCCAGCCTGCCCATTGCCTACTTTCATATTTCTAGCCTGCCCGACCGGCCCGCTGTTGAAAAACTTTCCCTCTTTCTCAAGCAGTCTCCCGCTTTCCTCTTCAACGCCCTTTCTCCTTCTCTCCACGAGTCTGAAGATTCAATTTCGAGAACTGGGTCTGTCTTCGTTTTAATGGGATTTGGGAATAATGCAATTCAGGCTGGGAGTTTGGACGTGGGCAAGTCAAATGGAAGGAAGAAGAAAGATGGTGCAGAGAAGGAGAGTGGGTGTTGGCCTAAATTCATTTGCATCGGAAGCTGCATACCTTCTAGATCAAAGATTGATAACTCCATAAGTGGTGGCACTAGTTCTCAGAATGTGGAAAACAAATCTACAAATGAGAAAATCAAAGACCAAACAGTTGCTCCTCCAGGGTCTTCTACTACTACAAGTAATGCAGGAAGTATTCCCTCCACTCCAAAATTTAGTGAGGAACTGAAGGTTTCTTCTCGGTTGAGAAAATTCACATTCAATGAACTTAAATTGTCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGATTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGCATGGAACTGCACCTGTCAAACCAGGTACTGGGCTTACTGTTGCAGTGAAGACTCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAACTAAACTATCTTGGTGATCTTGTCCATCCAAATCTGGTTAAATTGATTGGTTTCTGTATTGAAGATGATCAAAGATTATTAGTTTATGAGTTTATGCCCCGAGGAAGTTTAGAGAACCATCTCTTCAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCAAAAGGTCTAGCCTTTCTTCATGAAGAAGCTCAGAGGCCTGTAATATATCGAGATTTCAAGACATCTAATATCCTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTGTCAACAAGAGTTATGGGAACGTATGGTTATGCAGCTCCTGAGTATGTGATGACCGGACATTTGACATCAAAAAGTGATGTCTACAGTTTTGGGGTGGTGCTGCTTGAAATGCTTACTGGACGACGATCAATTGATAAAAATAGACCAAATGGGGAACACAACTTGGTGGAATGGGCTAGACCTGCACTAGGAGACTGGAGGATGTTCTACCGAATAATTGATCCTCGACTTGAAGGTCACTTCTCAATTAAAGGTTCACAGAAAGCCGCCCAACTGGCTGCTCAATGCCTTAGCCGTGATCCAAAATCTAGACCTATGATGAGTGAAGTTGTTCATGCTCTAAAGCATTTGCCAAACCTTAAGGATATGGCTGTTTCATCTCAACACTTCCAATTCACAAGAGTAGATCGTACTATGTCCATGCCAAATCATAAAAATGGTTTTAAAACACAGCTAGCATCTGTATCAAGGAAAGGTCAACCTGTAAGGACCTTGTCGAGTCCAAATGGTCCACGTGGTTCTCCATATCATCAATATTCCAAGTCACCTAAACCTAATGGGTGA 1629 0.4303 MVVPFSLLPSLPIAYFHISSLPDRPAVEKLSLFLKQSPAFLFNALSPSLHESEDSISRTGSVFVLMGFGNNAIQAGSLDVGKSNGRKKKDGAEKESGCWPKFICIGSCIPSRSKIDNSISGGTSSQNVENKSTNEKIKDQTVAPPGSSTTTSNAGSIPSTPKFSEELKVSSRLRKFTFNELKLSTRNFRPESLLGEGGFGCVFKGWIEEHGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPALGDWRMFYRIIDPRLEGHFSIKGSQKAAQLAAQCLSRDPKSRPMMSEVVHALKHLPNLKDMAVSSQHFQFTRVDRTMSMPNHKNGFKTQLASVSRKGQPVRTLSSPNGPRGSPYHQYSKSPKPNG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1681 542 SUPERFAMILY Protein kinase-like (PK-like) 162 469 IPR011009 -
Dere01g1681 542 FunFam Serine/threonine-protein kinase BIK1 156 273 - -
Dere01g1681 542 Gene3D Phosphorylase Kinase; domain 1 168 273 - -
Dere01g1681 542 CDD STKc_IRAK 194 472 - -
Dere01g1681 542 ProSiteProfiles Protein kinase domain profile. 188 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1681 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Dere01g1681 542 ProSitePatterns Protein kinases ATP-binding region signature. 194 226 IPR017441 GO:0005524
Dere01g1681 542 MobiDBLite consensus disorder prediction 116 162 - -
Dere01g1681 542 MobiDBLite consensus disorder prediction 506 542 - -
Dere01g1681 542 FunFam Probable serine/threonine-protein kinase PBL8 274 489 - -
Dere01g1681 542 Pfam Protein kinase domain 191 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1681 542 Gene3D Transferase(Phosphotransferase) domain 1 274 494 - -
Dere01g1681 542 PANTHER OS01G0588500 PROTEIN-RELATED 137 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1681 Dere-ChrDere01 30259904 30265205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1681 146 485 Glycoside Hydrolase AT3G07070 51.705 5.37e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere01g1681 Pkinase 1.1e-46 CL0016