Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1675 ATGGAGACGACGATGATAAAAAGTGAAGAAAGCAAAAGAACTAGCCAAATATGCATGGCAGACGGTGAGTTCCATAGAGCTCGCTGTGTCAAGAGACGACGAAGAGAGCCTTCGGCTACTGCACTTAACAGCAACGATAATCAAAGTGATCAGAAGCAACAGCAGCTGCAGTCACAGTTACAAGTTGATCAAAATTTAAGTACCAACACCGTGAAAAGAAGCTCAAGATTTCGTGGTGTAAGCAGACATAGATGGACTGGTCGATTTGAAGCTCACCTATGGGACAAGCTCTCTTGGAACGTAACACAGAAGAAGAAAGGGAAACAAGGGGCTTACGATGAAGAAGAATCAGCAGCAAGAGCATACGATTTAGCTGCACTTAAGTACTGGGGAACATCAACTTTCACAAATTTTCCGATCTCAGATTACGAGAAAGAGATAGAGATAATGCAGACTATGACCAAAGAGGAGTACTTGGCCACTTTAAGAAGAAAGAGCAGCGGCTTTTCAAGAGGCGTATCGAAGTACAGAGGCGTTGCAAAGCACCACCATAATGGTAGATGGGAAGCAAGGATAGGGAGGGTTTTCGGAAACAAATATCTCTACCTTGGCACTTACAGCACCCAAGAGGAAGCTGCTCGTGCTTATGACATAGCAGCCATTGAGTACAGAGGGATCCATGCTGTAACAAACTTTGATTTGAGTACGTACATAAGATGGTTGAAGCCTACAAGAGAAAACATCCCAGAAGCAATACCTGAATCACAGGTAGTACCAGAGGCTCGGACAGAGACATCCCCATCTATCTATACTCCAATAGAGGAGAAGAAATCCTTGACCCTTCACAGTAATTCTTCCACAGATTACCTGAACTCCCCTCAAACGCGAGACACCTTCGAGAACAAAAGCTATTTAATGTCGAGCAATAAGACATCTTCTCCCGGTGCACTTGACCTTCTTCTTCGATCTTCAATATTCCGAGAATTGGTCAAAAAGAACTCTAATATATCTGGAGATGAGACTGATGGGGAAGAGACAAGGGATTTACAGCAGTTGTCTGGCGAAGGTGAGTTGGGTGGGATCTTCTACGATGGATTTGGCGATGACGTCCCATTTCTTTGCGATCCCAACAGATACAACTTAGAATTGCAAGAAAGAGAATTCCAGTCCCTTCTATGA 1179 0.4394 METTMIKSEESKRTSQICMADGEFHRARCVKRRRREPSATALNSNDNQSDQKQQQLQSQLQVDQNLSTNTVKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYEKEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLKPTRENIPEAIPESQVVPEARTETSPSIYTPIEEKKSLTLHSNSSTDYLNSPQTRDTFENKSYLMSSNKTSSPGALDLLLRSSIFRELVKKNSNISGDETDGEETRDLQQLSGEGELGGIFYDGFGDDVPFLCDPNRYNLELQEREFQSLL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1675 392 ProSiteProfiles AP2/ERF domain profile. 76 139 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 MobiDBLite consensus disorder prediction 33 54 - -
Dere01g1675 392 FunFam AP2-like ethylene-responsive transcription factor 174 235 - -
Dere01g1675 392 PRINTS Ethylene responsive element binding protein signature 215 235 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 CDD AP2 75 141 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 Gene3D AP2/ERF domain 75 141 IPR036955 GO:0003700|GO:0006355
Dere01g1675 392 Gene3D AP2/ERF domain 174 235 IPR036955 GO:0003700|GO:0006355
Dere01g1675 392 SMART rav1_2 76 145 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 SMART rav1_2 175 239 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 47 295 - -
Dere01g1675 392 SUPERFAMILY DNA-binding domain 75 141 IPR016177 GO:0003677
Dere01g1675 392 SUPERFAMILY DNA-binding domain 174 235 IPR016177 GO:0003677
Dere01g1675 392 CDD AP2 174 235 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 Pfam AP2 domain 174 225 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 Pfam AP2 domain 75 131 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 ProSiteProfiles AP2/ERF domain profile. 175 233 IPR001471 GO:0003700|GO:0006355
Dere01g1675 392 MobiDBLite consensus disorder prediction 40 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1675 Dere-ChrDere01 30211192 30213142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1675 72 272 AP2-EREBP Transcription Factor Family AT5G57390 58.019 1.37e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dere01g1675 AP2 2e-09 CL0081