Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1651 ATGGAGGAGAGGAACGATATGGATAAGATTAATGATGATGTGATGTTGCCCGGTTATCGTTTTCACCCCACGGACGAGGAGCTTGTTGATTTTTATCTCACGAGAAAGATTCAGCTGAAATCTCTTCCCATTGATCTAATCAAGCAAGTGGATATTTACAAATATGATCCTTGGGATCTTCCAAGTAAGAACTCTTACGACAGACAACGTGTTCTAGCAATCAAGATATTCAAGAAAACAAACTCGATGTCCATGGCGCAGAAGGCTCTATCTCAACCTTGGATCACTCAGTTACCAGAGAGCATGGTGTCTGATATACTCGCTCGGAGCGCAAACCACAACCACTTGAGTTCAGAGAACATTTCTTGCACCACAGAGATAGGATCAGCGTCAGGGATTCAGTTCTGTGGAGGTAACCAGCAGGGATTACAGGACCAAGTGTCCAGTGCTCATTTCTCAGCTTCAGATATTCCCATTAATACCAGAGTCTCCAAGTCCTCCAAGTCTTCCCAGATTCCTGTGTCAATGTCAAACGGTTACCTACCAGACAACATGATGTTCTCCACGTTCGAATCGTCAGGCCCTTCTGCCTATATAGGCTTTGAGGGGGCAAATAATCAGTTTAGCAGCTTCTCAGTGAGTGTGCCTCAAGATGTACAAGAATTAAACGTGAGCACGAGTGCTATAGCAGATGCAATTGGGTTTCCCTTCAGCTTGCCTTCGATTCCAAACGATGCTTGGAAGCCTACTCTGCCATGGGACTCACCACCTTGTCCCACCGACATGTCTAATAATAGATGCTGCATTTAG 810 0.4506 MEERNDMDKINDDVMLPGYRFHPTDEELVDFYLTRKIQLKSLPIDLIKQVDIYKYDPWDLPSKNSYDRQRVLAIKIFKKTNSMSMAQKALSQPWITQLPESMVSDILARSANHNHLSSENISCTTEIGSASGIQFCGGNQQGLQDQVSSAHFSASDIPINTRVSKSSKSSQIPVSMSNGYLPDNMMFSTFESSGPSAYIGFEGANNQFSSFSVSVPQDVQELNVSTSAIADAIGFPFSLPSIPNDAWKPTLPWDSPPCPTDMSNNRCCI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1651 269 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 65 - -
Dere01g1651 269 SUPERFAMILY NAC domain 13 67 IPR036093 GO:0003677|GO:0006355
Dere01g1651 269 Gene3D NAC domain 24 96 IPR036093 GO:0003677|GO:0006355
Dere01g1651 269 ProSiteProfiles NAC domain profile. 15 166 IPR003441 GO:0003677|GO:0006355
Dere01g1651 269 Pfam No apical meristem (NAM) protein 17 71 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1651 Dere-ChrDere01 29900958 29902305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1651 2 61 NAC Transcription Factor Family AT5G39820 73.333 4.11e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere01g1651 NAM 1.3e-13 No_clan