Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1638 ATGAATCAACACAATCGCTTCGAAGATGCAGACGAAATCATTGAGGATGCTGCTGTGAGCTCCAACCTTGATGATTCCATTTGCGGGCCCGATGGCTCTGTTGACAAGGTTGTTGAAGGCTCAATTGGCGAGCCTTCCGTGGCCTTTATGGATTCAGATGATAAAACGAGTGCCGATTATTACTTCGATTCCTACTCTCACTTTGGAATTCACGAAGTAAGTGTTTCAACTTTGATGCCGGCTGGTTTGACCTATTATTGTTCAAGCTTTCCCTTTTTTTTGGAAATGTTGAAGGACTCGGTGAGAACTAAGACATATCAAAATGTTATTTATCAGAATAAATTTTTATTTAAGAATAAGGTAGTTCTTGATGTGGGTGCTGGGACTGGAATTCTATCTCTATTTTGTGCCAAAGCCGGGGCAGAACATGTCTATGCGGTTGAGTGCTCTGATATGGCCGATATGGCAAAGGAGATAGTTGAAACTAATGGGTACTCTAAAGTCATAACAGTTCTAAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGCTGAATACTGTTCTCTATGCACGTGACAAATGGCTAGTGGATGATGGAGTTGTGCTGCCAGATAAAACTTCTCTCTATCTTACAGCAATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGTTTTGACATGAGCTGCATCAAGAAGCAAGCACTTATGGAGCCTCTTGTTGACACAGTTGACAAAAATCAGATTGTTACAAATTGCCAGCTACTAAAGACGATGGATATCTCTAAGATGCTACCTGGAGATGCTTCCTTCACAGCACCTTTCAAGCTTGTAGCCGAACGTGATGATTATATTCATGCTCTTGTTGCATATTTTGATGTATCGTTTACCAAGTGTCATAAATTGATGGGTTTCTCTACAGGACCAAGATCACGTGCTACTCATTGGAAGCAAACAGTCCTTTACCTAGAAGACGTGTTGACCATATGTGAAGGAGAGGCAATTGCTGGGAGCATGACCGTGGCGCAGAATAAAAAAAATCCTCGGGATGTTGACATAATGCTCAAGTATTCATTAAATGGTCGGCGATGCACAGTTTCAAGGGTCCAGTATTACAAGATGCGCTGA 1206 0.4046 MNQHNRFEDADEIIEDAAVSSNLDDSICGPDGSVDKVVEGSIGEPSVAFMDSDDKTSADYYFDSYSHFGIHEVSVSTLMPAGLTYYCSSFPFFLEMLKDSVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKEIVETNGYSKVITVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGVVLPDKTSLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDKNQIVTNCQLLKTMDISKMLPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICEGEAIAGSMTVAQNKKNPRDVDIMLKYSLNGRRCTVSRVQYYKMR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1638 401 Gene3D Vaccinia Virus protein VP39 49 223 IPR029063 -
Dere01g1638 401 Pfam Ribosomal protein L11 methyltransferase (PrmA) 117 192 - -
Dere01g1638 401 Gene3D - 225 401 - -
Dere01g1638 401 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 400 IPR029063 -
Dere01g1638 401 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 49 388 IPR025799 GO:0016274|GO:0018216
Dere01g1638 401 FunFam probable protein arginine N-methyltransferase 1 76 223 - -
Dere01g1638 401 FunFam Blast:Protein arginine N-methyltransferase 1 225 401 - -
Dere01g1638 401 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 58 381 IPR025799 GO:0016274|GO:0018216
Dere01g1638 401 CDD AdoMet_MTases 122 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1638 Dere-ChrDere01 29710958 29715901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1638 35 364 C2H2 Transcription Factor Family AT3G12270 35.493 5.29e-61 206