Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1630 ATGGTGGAGAAGACAAAGGGCAGGAAGGAGGAGGTGGTTACCCGAGAGTACACCATTAACCTCCACAAGCGCCTGCATGGCTGCACATTTAAGAAGAAAGCTCCTAAAGCAATAAAGGAGATAAGGAAGTTTGCCCAGAAAGCCATGGGTACCAATGATGTGAGAGTGGATGTGAAGCTGAACAAGTGCGTCTGGAGCCAGGGAATCCGAAGTGTCCCAAGGAGGATTAGAGTACGTATTGCTCGCAAGAGGAATGACGATGAGGATGCAAAGGAGGAGCTATACTCCCTCGTTACTGTAGTTGATGCCACCCGAGAAGAGCTCAAAGGGTTGGGCACCAAGGTTATTGATGAGGATTGA 360 0.4917 MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKCVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVDATREELKGLGTKVIDED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1630 119 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Dere01g1630 119 PANTHER 60S RIBOSOMAL PROTEIN L31 2 118 IPR000054 GO:0003735|GO:0005840|GO:0006412
Dere01g1630 119 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Dere01g1630 119 FunFam 60S ribosomal protein L31 6 119 - -
Dere01g1630 119 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Dere01g1630 119 Gene3D - 9 119 IPR023621 -
Dere01g1630 119 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Dere01g1630 119 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1630 Dere-ChrDere01 29634783 29636379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1630 2 119 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 79.661 5.13e-65 191