Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1609 ATGAAGATTGAGCAATTGGACGATGCAGATTGCAGTAGGGACGAAAGTAGTTATGAGTATCAGATTGTGAGGGTTGACGCAAAGAGAGCATTAGTTGGAGCAGGTGCTCGGATCCTGTTTTACCCGACGCTTTTGTATAATGTGCTTAGGAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATGAAGTCGATGAGTTTTTATTATTGGGTGCTGTTCCATTTCCAAAAGATGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAGCCTTATGAAACTTTGGTACCATCATCATTATATCATGTTCACGGGATTAATCATTTAGTGATTCCTACAAGGGATTATCTCTTTGCCCCTTCCTTTGTGGATATTAGTCGGGCTGTACAATTTATTCATCAGAATGCATGCTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGTCGGGGAAGGAGTACAACAATTGTTCTTTGTTATCTGGTTGAATATAAGCACATGACTCCTGCCACTGCCCTGGACTATGTGCGGTCTCGAAGACCTAGGGTGCTGCTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATAGCAAGTGCCGACCTTCCCCTTGTCCTAGGCCTACTCCTCCTTCTCCTACTCCTCCTACTCCATACTCTCCCTCTGGGGATGCAGTTCTTATAACCAAAGCTGATCTTGAGGGTTACCATAACACATGCGATGCTGGTATGGAACTGGCCCTTTTTACCAAAGTGCCAAAGGCTAAGCCCATGATAGCAAGACTATCTTGCCTGTTTGCATCCCTTAAAGTTTCTGGTAGCAGTGTACCAGCAATCAGGCGGTTGCCAGTTTCTGAGGCACGTGCTTGCTAA 882 0.4501 MKIEQLDDADCSRDESSYEYQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHVHGINHLVIPTRDYLFAPSFVDISRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPATALDYVRSRRPRVLLAPSQWKAVQNYSKCRPSPCPRPTPPSPTPPTPYSPSGDAVLITKADLEGYHNTCDAGMELALFTKVPKAKPMIARLSCLFASLKVSGSSVPAIRRLPVSEARAC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1609 293 FunFam Dual specificity phosphatase domain protein 59 206 - -
Dere01g1609 293 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Dere01g1609 293 CDD PTPMT1 59 202 IPR044596 GO:0004721
Dere01g1609 293 Gene3D Protein tyrosine phosphatase superfamily 59 204 IPR029021 -
Dere01g1609 293 MobiDBLite consensus disorder prediction 205 224 - -
Dere01g1609 293 MobiDBLite consensus disorder prediction 206 223 - -
Dere01g1609 293 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Dere01g1609 293 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 201 IPR029021 -
Dere01g1609 293 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Dere01g1609 293 Pfam Dual specificity phosphatase, catalytic domain 82 201 IPR000340 GO:0008138|GO:0016311
Dere01g1609 293 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Dere01g1609 293 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1609 Dere-ChrDere01 29397292 29399390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1609 1 273 Protein tyrosine phosphatase (PTP) family AT2G35680 49.841 4.93e-99 292