Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1555 ATGTACTCGAGGCTGTTACTGAGCAAAAGAGGCGTGGAATCCAAACTCCTTCCCTACCTGAACCCAGACGAGAAGATCGAGGACAAGGACGGAGTTCCAGTCGCTGTGTATGCCAGAGATGGAAGGCTCTACTACCTGACAATCAAAATTTGGAAACCTAAAAGATATGTCCTACGTGGAGCATGGGATACTTTCTGCAGAAGACAAGGCGTCCAAGCTGGAGATACCGCCTCAGTATGGCTCTTTCAACGACGCAATCCTACGACCAGACTGCTCACACTTGTTTTCGCTCCCCTCTCATCCCGCAGAGACTACTAA 318 0.4969 MYSRLLLSKRGVESKLLPYLNPDEKIEDKDGVPVAVYARDGRLYYLTIKIWKPKRYVLRGAWDTFCRRQGVQAGDTASVWLFQRRNPTTRLLTLVFAPLSSRRDY 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1555 105 Gene3D - 2 95 IPR015300 -
Dere01g1555 105 ProSiteProfiles B3 DNA-binding domain profile. 1 98 IPR003340 GO:0003677
Dere01g1555 105 SUPERFAMILY DNA-binding pseudobarrel domain 4 85 IPR015300 -
Dere01g1555 105 PANTHER OS05G0237600 PROTEIN 3 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1555 Dere-ChrDere01 28858433 28858750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1555 5 96 B3 DNA Binding Superfamily AT4G03170 34.043 7.70e-09 49.3