Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1551 ATGGGTTGCGTTTATTCAAGGGTTTGCATAGGTGAGGTTTGCACTCCAAGAAATTCTAGGATCAATGAAGGCCAAAATGCGAGAACTAATGAAGCTGCCTTGTTCTCTCCTGCTTCCTCCGGTGTTCAGGAAGGTGAAATTAGAGATCAATTTAATCAATTGAGCTTAACCAGAGACTCTGAAGTAGGCATCAGGAGGCTAGCTAGGGTTTCAGCGCAGTTCCTACCTCCCGATGGCTCGCGAACCGTGAAAGTTCCTTCGGGAAACTTTGAATTGCGTTATTCGTACTTGTCACAGAGAGGTTATTACCCTGATGCTCTAGATAAAGCTAACCAAGACAGTTTTTGCATTCACACCCCGTTCGGTACACACCCTGATGACCATTTCTTTGGGGTTTTCGATGGGCACGGAGAGTTTGGGACCCAGTGTTCGCAGTTCGTGAAGCGAAAGCTATGTGAGAATTTGCTTAGGAATAGTAAATTTCGGGTAGATGCTGTGGAGGCCTATCACGCAGCGTTTTTGGCGACAAACTCGCAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGTACTACAGCAATTACAGTGTTGGTTCGGGGTAGGACTATATATGTAGCCAATTCGGGTGATTCCAGGGCGGTGATTGCAGAGAGCAGAGGGAACGATATTGTGGCAGTCGACTTATCCATGGATCAAACACCTTTTAGGTCAGACGAACTTGAAAGGGTCAAGCTTTGTGGGGCAAGAGTTCTTACACTGGATCAGATTGAAGGGCTTAAGAATCCTGATGTTCAATGCTGGGGCACAGAAGAAGGAGATGATGGTGACCCGCCAAGATTGTGGGTGCCGAATGGGATGTACCCTGGTACAGCTTTCACGAGAAGCATTGGTGATTCAATTGCCGAGACCATTGGGGTTGTTGCTACTCCTGAAATTGTTGTTTTCGAGCTCACACCGAATCATCCTTTCTTTGTGCTTGCTAGCGATGGTGTATTTGAGTTTCTATCCAGCCAGACTGTGGTTGAAATGGTTTCTAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATTGTGGCTGAATCTTATCGGCTCTGGCTACAGTATGAAACTCGTACAGATGATATTACAGTCATTGTTGTTCATGTTAATGGACTAACTGATCCTGCCGTTGGTCAATCTGCATGTTATAGTGACATTCATAGAACTCCAGTTCCTCAAGTTGTTGAGGTGACAGGATCAGAATCTCCTTCCACCTTGAGCTGGAACTCTAGGAACCCACGTGTGAGGCATGACTTATCAAGGGCACGTCTCCGAGCAATTGAAAATTGCCTAGAGAATGGGCAAGCTTGGGTTCCTCCGTCTTCAGCTCACAGGAAGACATGGGAGGAAGAAGCACACATTGAGCGGGCATTGCATGATCATTTTCTCTTTAGAAAACTTACTGATTCGCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTTCAACCTGGGGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTCGAGGTCTTGGCAACTCAGGAGGAACAAAATGGGGAAGTGTCTAAGGTTTTGCAGCGCTACACAGCTGAAAAATTGTCTTGCTTTGGAGAACTTGCTCTAATGTATAATAAACCACTCCAGGCCTCTGTGCGTGCTGTAACGGAAGGAACTCTATGGGCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCAAAGTTCTCTAACTTATCATCCTTGAAGTTGCTTCGGTCTGTAGATCTGCTTTCAAAGTTGACAATCTTACAACTAAGTCAGATCTCGGAGTCCCTCTTAGAAGTTTCCTTTTCAAATGGACAGACAATAATTGATCAAAATGAAGCCCTGGCATTGTACATAATCCAGAAGGGACAAGTGAAAATAACTTTCGATGCAGATTTATTGAGAAGTCCTAACGCCGGCAGCCTGAAGCCTGATCATGAATATGAGAATGATGATTTACAGAGCCAGAAAGAGCTATCAGTGGAGAAGCCTGAGGGAAGTTATTTTGGTGAATGGGCTCTTCATGGTGAAAATATTGGTTCCTTAAGTGCTGTTGCTGTAGGTGATGTTGTATGTGCTGTATTAACAAAGGAGAAATTTGAATCAGTAATTGGCCCCTTGAAAAAGCTTTCTCAGGAAGATCAGAAGTCAAAGGATAATTCCTCAGATTATTCCAAGGAATCAACTGGAAGTTTTAATTTCTCGTCCCTTGATGAAGTCAAGCTCTCGGATTTGGAATGGAAAAAGAGCATATATTCCACTGACTGCTCTGAGGTTGGGCTTACGCTATTAAGAGACTCAGAAAATGTGCTTACTTTGAAGAGATTCTCTAAGCCAAAAGTGAAAAGGCTGGGAATGGAAGCACAAGTCTTAAAAGAGAAAACTTTGATCAAGAGCATGAGCTCTTCAGCTTGTATACCACAGGTTCTGTGCACTTGTGCTGATCGAGTATATGCTGGGATACTACTAAATACAAGCCTTGCTTGCCCATTATCTTCCATACTTACAAGTCCTTTTGGTGAATCATCAGCCAGATTTTGTGCTGCTTGCGTTGTTACTGCCTTAGAAGATTTGCATAAGAATGGGATTCTCTACAGAGGTGTGTCACCTGACCTTCTGATTCTGGACCAAACTGGATGTATTCAGCTAGTGGACTTCAGATTCGGGAAGGAACTCTCAGGTGAAAGAACTTTCACAATCTGTGGAATGGCAGACTCGTTAGCCCCTGAAATTGTTCTGGGAAAAGGCCATGGTTTCCCTGCTGACTGGTGGGCATTGGGTGTTCTGATATATTTTATGTTACGAGGAGAGATGCCTTTTGGATCATGGAGAGAAAATGAGCTTGATACTGTTGCCAAAATTGCAAAACGGAAGCTAAACCTTCCAGAAACTTTCAGCCCTGAGGCTATTGATCTCATCACTAAGTTACTTGACGGTGATGAAAACACTAGACTTGGTAGCCAAGGTCCTGATTCTGTTAAAAGTCATCCTTGGTTTAATGGTTTTGAATGGGAAGGGATTAGAAACCGTACCTTTCCTGTTCCTCCAGAAATTACCTCTCGTATAACGCAATACTTGGAAACTCATTCTGAGGATTGCACTGGCTCTCAAGGATCCCCACCACAGGAGTTAGAAGAACTTAACGTTCCTGAATGGCTTGAGGACTGTGGAAAAGCAATTGGTCTTGGTGATTACCATGCTTCCTTTAATTTCTTGAAGTTGTACAATGGATAG 3300 0.4364 MGCVYSRVCIGEVCTPRNSRINEGQNARTNEAALFSPASSGVQEGEIRDQFNQLSLTRDSEVGIRRLARVSAQFLPPDGSRTVKVPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTHPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSKFRVDAVEAYHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAESRGNDIVAVDLSMDQTPFRSDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVFELTPNHPFFVLASDGVFEFLSSQTVVEMVSKFKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHVNGLTDPAVGQSACYSDIHRTPVPQVVEVTGSESPSTLSWNSRNPRVRHDLSRARLRAIENCLENGQAWVPPSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEQNGEVSKVLQRYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWALRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQISESLLEVSFSNGQTIIDQNEALALYIIQKGQVKITFDADLLRSPNAGSLKPDHEYENDDLQSQKELSVEKPEGSYFGEWALHGENIGSLSAVAVGDVVCAVLTKEKFESVIGPLKKLSQEDQKSKDNSSDYSKESTGSFNFSSLDEVKLSDLEWKKSIYSTDCSEVGLTLLRDSENVLTLKRFSKPKVKRLGMEAQVLKEKTLIKSMSSSACIPQVLCTCADRVYAGILLNTSLACPLSSILTSPFGESSARFCAACVVTALEDLHKNGILYRGVSPDLLILDQTGCIQLVDFRFGKELSGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAIDLITKLLDGDENTRLGSQGPDSVKSHPWFNGFEWEGIRNRTFPVPPEITSRITQYLETHSEDCTGSQGSPPQELEELNVPEWLEDCGKAIGLGDYHASFNFLKLYNG 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1551 1099 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Dere01g1551 1099 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Dere01g1551 1099 PRINTS cAMP-dependent protein kinase signature 722 734 - -
Dere01g1551 1099 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Dere01g1551 1099 MobiDBLite consensus disorder prediction 733 752 - -
Dere01g1551 1099 SMART cnmp_10 603 741 IPR000595 -
Dere01g1551 1099 SMART cnmp_10 477 600 IPR000595 -
Dere01g1551 1099 SUPERFAMILY cAMP-binding domain-like 458 587 IPR018490 -
Dere01g1551 1099 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 463 1055 - -
Dere01g1551 1099 Gene3D - 87 384 IPR036457 -
Dere01g1551 1099 SMART PP2C_4 83 381 IPR001932 -
Dere01g1551 1099 SUPERFAMILY cAMP-binding domain-like 595 728 IPR018490 -
Dere01g1551 1099 SUPERFAMILY PP2C-like 81 385 IPR036457 -
Dere01g1551 1099 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Dere01g1551 1099 Gene3D Phosphorylase Kinase; domain 1 765 1041 - -
Dere01g1551 1099 Pfam Cyclic nucleotide-binding domain 622 726 IPR000595 -
Dere01g1551 1099 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Dere01g1551 1099 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Dere01g1551 1099 Pfam Protein kinase domain 779 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1551 1099 CDD PP2Cc 109 383 IPR001932 -
Dere01g1551 1099 SMART serkin_6 774 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1551 1099 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Dere01g1551 1099 CDD CAP_ED 603 735 IPR000595 -
Dere01g1551 1099 SUPERFAMILY Protein kinase-like (PK-like) 749 1052 IPR011009 -
Dere01g1551 1099 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Dere01g1551 1099 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 451 591 - -
Dere01g1551 1099 Gene3D Transferase(Phosphotransferase) domain 1 852 1039 - -
Dere01g1551 1099 ProSiteProfiles cAMP/cGMP binding motif profile. 603 728 IPR000595 -
Dere01g1551 1099 Gene3D Jelly Rolls 593 746 IPR014710 -
Dere01g1551 1099 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Dere01g1551 1099 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 593 742 - -
Dere01g1551 1099 ProSiteProfiles Protein kinase domain profile. 745 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1551 1099 Gene3D Jelly Rolls 452 592 IPR014710 -
Dere01g1551 1099 CDD CAP_ED 477 586 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1551 Dere-ChrDere01 28824432 28833090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1551 1 1049 PP2C-type Phosphatase Gene Family AT2G20050 69.353 0.0 1501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Dere01g1551 Pkinase 4.1e-31 CL0016