Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1549 ATGGTGAGAGTAATTCCCATGGCGTCTTCGATTCGACCCTCTCTCTCGTCCTTCAGGCTATCCGGTGGTTCTCGTTTCGTCCCTACTTTCTCTTCCTACAGCCCTTCTCGGCGTCTCTCTTTGTTGCATCTTGGTAGCGCTGTTCCTCAGTCCCATAGTTTTGGCCTGAAAGCACCCAGGCTTTTGAGGCGAGATGGTAACTGCATGGGATTGATGGGAACTGGGATCGTGTCCCAGGCAAGCACAGCTGCTTCACCAGAAAATGTACTTGAGTGGGTCAAACAAGACAAGCGAAGAATGCTTCATGTTGTATACCGTGTTGGTGACCTGGACAGGACCATAAAATTTTATACAGAATGCCTGGGAATGAAGCTGCTGAGGAAGCGTGACATACCAGAGGATAGATATACTAATGCTTTTCTTGGATATGGGCCTGAGGATTCACACTTTGTTATTGAACTGACATACAATTATGGGGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGAGGATGTTGCAAAAACAGTTGAACTCATTCGGGCAAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGCAAATCAATAATTGCATTTATCGAGGATCCTGATGGTTATAAATTTGAACTTTTGGAAAGAGGACCCACACCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTAGGTGATCTTAAACGTTCAATTGAATTTTATGAGAAGGCTTTTGGTATGGAGCTTCTTCGAACACGTGATAATCCAGAGTACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGTGCTGTTTTGGAGTTGACTTACAACTATGGAGTCACTGAATATGACAAAGGAAATGCTTATGCTCAGATTGCAATTGGCACAGATGATGTGTACAAAACTGCAGAAGCTATTAAAATTGCTGGAGGAAAGATTACCCGAGAGCCTGGACCCTTACCTGGTATCAGCACAAAAATTACAGCATGTTTGGATCCTGATGGTTGGAAGACGGTGTTTGTAGATAATGTCGATTTTCTCAAGGAGTTGGAGTAG 1086 0.4383 MVRVIPMASSIRPSLSSFRLSGGSRFVPTFSSYSPSRRLSLLHLGSAVPQSHSFGLKAPRLLRRDGNCMGLMGTGIVSQASTAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELIRAKGGKITREPGPVKGGKSIIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLKRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKIAGGKITREPGPLPGISTKITACLDPDGWKTVFVDNVDFLKELE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1549 361 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 98 228 IPR029068 -
Dere01g1549 361 PANTHER LACTOYLGLUTATHIONE LYASE 78 361 - -
Dere01g1549 361 ProSitePatterns Glyoxalase I signature 1. 232 253 IPR018146 GO:0004462|GO:0046872
Dere01g1549 361 Gene3D - 73 224 IPR029068 -
Dere01g1549 361 ProSitePatterns Glyoxalase I signature 2. 166 178 IPR018146 GO:0004462|GO:0046872
Dere01g1549 361 Gene3D - 226 361 IPR029068 -
Dere01g1549 361 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 232 347 IPR004360 -
Dere01g1549 361 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 100 220 IPR004360 -
Dere01g1549 361 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 229 353 IPR037523 -
Dere01g1549 361 FunFam Lactoylglutathione lyase 96 225 - -
Dere01g1549 361 CDD GlxI_Ni 230 351 - -
Dere01g1549 361 ProSitePatterns Glyoxalase I signature 1. 102 123 IPR018146 GO:0004462|GO:0046872
Dere01g1549 361 FunFam Lactoylglutathione lyase 226 361 - -
Dere01g1549 361 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 99 223 IPR037523 -
Dere01g1549 361 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 230 353 IPR029068 -
Dere01g1549 361 CDD GlxI_Ni 100 221 - -
Dere01g1549 361 NCBIfam lactoylglutathione lyase 99 224 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1549 Dere-ChrDere01 28799784 28805062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1549 232 350 Calmodulin-binding Proteins AT1G08110 29.655 7.17e-12 62.8