Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1532 ATGGACCCTCCTCCGAAGAGCTGGAGCATCCATACCCGAGCTGAGATTATTGCCAAATATCAAGTCTTAGAGCGGGTCGGCTCCGGAGCCTACTCCGACGTCTACAAAGGTCGTCGTCTCTCCGATAACCTCATCGTCGCCCTCAAAGAAGTTCACGACATCCAATCTGCGTTCCGAGAAATCGAGGCTTTGCAGATCCTTCAGGGCTCCAAAAATGTCGTCGTCATGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTGCTCGTTCTCGAGTTTTTAAGAACTGACTTGGCCACGGTGATCAAAGAGGCCAAGAAGGAAGCTGGGGGTCTTAGCGTTGGGGAGATTAAGAGGTGGATGATCCAAATTCTTTGTGGAGTCGATGCGTGCCACGGAAATATGATCGTGCATCGTGATTTGAAGCCCAGTAATTTGTTGATTTCGGAAGATGGCGTGCTCAAGTTGGCTGATTTCGGACAGGCAAGGATACTGGGGCCTGGATATGATGCTATGGATGAGAACCCCCAATCTTATGAACACCATACTTCAAATTTTGATAGTTCCTTTCAACATCCTGAAGTCTTTCCTCAAACAGAGAACCTAAACCAAGAAGGGTACGAAAATCAAGAACAGGGAACTGTGAGTCGAGAAGAATATTTTAGAGTCTTAGATGAGCTGAAAACTAAGAGATCCACAGAAGATATTGATAAAGATACAAGCTTCCAAGATGGAAATACATCTTGTCTTGCTACATGCACAACAAGTGACATAGAAGATGATCTTTTGAAGAGTTCTTTTACATACGAAGCAGAGGAGGAGGGAGGCAATGAACAAGGTTGTCTCACATCATGCGTTGGAACACGTTGGTTCAGGGCTCCTGAGCTGCTTTATGGATCCTCTGACTATGGGTTAGAGATTGATCTCTGGTCATTGGGCTGTATATTTGCAGAGCTCCTAACTCTGGAGCCCTTATTTGCTGGGACAGCTGATATTGATCAGCTCAGCAAAATTATTGATGTTCTAGGCAACCTTAATGAGGAAGCCTGGCCTGGTTGTTCTAAACTTCCTGATTATAGATCAATCTCCTTCAGTAAGGTGGAGAACCCTGCTGGCCTTGAAGCCTGCCTGCCCAACCGATCTCCTGATGAAGTCTCTCTTATAAATAAACTGATTTGTTATGATCCAGCTAGAAGAGCTACAGCAATGGAGCTACTTCAAGACAAGTATTTTAATGAAGAACCTCTACCTGTACCTATTTCCGAGCTTCGTGTTCCTTTGACAAGAAATGGACGAGATGAGGACTCTCGCGGTGGATTGTATGATCAGTATGAGATGGATTCCGATTCTGATTTTGAAGACTTTGGCTCTCTGAATGTCACCAGAAGTGGTACTAATTTCTCCATACAATTTCCCTGA 1419 0.4538 MDPPPKSWSIHTRAEIIAKYQVLERVGSGAYSDVYKGRRLSDNLIVALKEVHDIQSAFREIEALQILQGSKNVVVMHEYFWREDEDAVLVLEFLRTDLATVIKEAKKEAGGLSVGEIKRWMIQILCGVDACHGNMIVHRDLKPSNLLISEDGVLKLADFGQARILGPGYDAMDENPQSYEHHTSNFDSSFQHPEVFPQTENLNQEGYENQEQGTVSREEYFRVLDELKTKRSTEDIDKDTSFQDGNTSCLATCTTSDIEDDLLKSSFTYEAEEEGGNEQGCLTSCVGTRWFRAPELLYGSSDYGLEIDLWSLGCIFAELLTLEPLFAGTADIDQLSKIIDVLGNLNEEAWPGCSKLPDYRSISFSKVENPAGLEACLPNRSPDEVSLINKLICYDPARRATAMELLQDKYFNEEPLPVPISELRVPLTRNGRDEDSRGGLYDQYEMDSDSDFEDFGSLNVTRSGTNFSIQFP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1532 472 Gene3D Transferase(Phosphotransferase) domain 1 107 215 - -
Dere01g1532 472 FunFam Cyclin-dependent kinase F-1 11 105 - -
Dere01g1532 472 SUPERFAMILY Protein kinase-like (PK-like) 4 425 IPR011009 -
Dere01g1532 472 Gene3D Transferase(Phosphotransferase) domain 1 258 418 - -
Dere01g1532 472 SMART serkin_6 20 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1532 472 Pfam Protein kinase domain 20 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1532 472 Pfam Protein kinase domain 279 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1532 472 Gene3D Phosphorylase Kinase; domain 1 11 106 - -
Dere01g1532 472 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Dere01g1532 472 ProSiteProfiles Protein kinase domain profile. 20 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1532 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Dere01g1532 472 PANTHER CELL DIVISION PROTEIN KINASE 19 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1532 Dere-ChrDere01 28627970 28629933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1532 4 472 Core Cell Cycle Gene Families AT4G28980 64.780 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Dere01g1532 Pkinase 1.7e-33 CL0016