Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1529 ATGGGAGAAGGTGAGGGGGGTGATTGCCCTCCGAAGAATGTATTACCAGATTCTGGTGCAGCAGCGTTGCCGTTGGATGTTCCCGCGAAGAAGCTAGCAAGGCAACTCGATTTTACGGGTTTTGGGGGGGTATCGGGGAGTGTGGCCTTGCCAGAACATCCGCAATTGCAAGTGCGGCCTCAGTCACGCCCTCAGTCACTGCCTCTGGGACTGACACAACAACCCGTGGTTGTGATGCCAGTGCCGCCGCTGGCACCACATTCTTCAGTGAGAGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACTTAACTTTGAAATGAAAGAGTCTACTCCAAAGAAGCAAAAACAGTGCAATTGTAAACACTCAAAATGCTTAAAGCTATACTGTGAATGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGTAAATTGCTATAACAATGTTGAAAATGATGCTGCTAGACGAGAAGCTGTCGAAGCTACTCTGGAGCGCAATCCAAATGCATTTAGGCCGAAAATTGCAAGCAGCCCTCATGGAACACGTGATATCAGGGAGGAGACCGGGGAAGTTTTAATATTAGGGAAGCACAACAAGGGCTGCCACTGTAAAAAGTCAGGGTGCCTCAAAAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAATAACAGTATAGCATATATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTTTTCGTCCCCTCCAGTATCCAAGAAAAGAAGAGGTCAGGAGCTCTTCTTTGGGCCAACAGCCAAGGATCCATCTGTTGGCAGGCTTGGGCAATTTCAGCAGGCAAACCATGTCAGAGGTTCTGCACCCTCCTCATCCTTGTCTTCTGTCCCTGGTGCTCGGATTGGAACTGCTGCATTAGGCCCTTCAAAATTTTCATACAGGTCTCTTTTGGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCAGTTCTCGTGCTAGTATCAGGACAAGCTGCAAAGACACTCTCAGACCAGAAAAATTTAGTGGACAACCATACTGAAGATCAGACAGAGACTTCCCTTGCTTCTTCAACACAAGAGCAATTGCCTAGTCAAAAGGAAACTGATGTTGAGAAAACTACAGCCGATGATTGTTTGAGTGCAAACCAAACGGATAAATTCAGCCCAGATGATTCCAGTTCAGATGGTGCTGATGTCCCAAAGGGGAGGCCAATGTCTCCTGGAACTCTGGCCTTGATGTGCGATGAGCAAGATACAATGTTCATGACAGCTCCCTCTCCTAATGGTTCAATGGCCCATGCCTGCAACACATCTTCACAGTCTGCTTGTGGACCAGGCATGACAGAGGTGCACGCAGAGCAAGAAAGGATAGTATTGACGAAGTTCAGAGATTTTCTAAACAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCTAGAAGTGAATTAGTGAGTCAAAAGGACCCAATCAGCAGTAGTGTGGGAAATACAAGTACTGAGACAACACATCAGCACGTAGCCACTAGTAATGGTGTTCCCAAAGCTTTAGTCCCACTGATGGCCGCAAGTATGAACATGATAAATTCAACAGCTTTAATCCCTGGTAATCTTGCTCCTGAAAATGGGGACAATAAGCCAAAGATTGAGAAGGAGATATGA 1785 0.4571 MGEGEGGDCPPKNVLPDSGAAALPLDVPAKKLARQLDFTGFGGVSGSVALPEHPQLQVRPQSRPQSLPLGLTQQPVVVMPVPPLAPHSSVRVGKPESPKSRSRLNFEMKESTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENDAARREAVEATLERNPNAFRPKIASSPHGTRDIREETGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNSIAYIQQAANAAITGAIGSSGFSSPPVSKKRRGQELFFGPTAKDPSVGRLGQFQQANHVRGSAPSSSLSSVPGARIGTAALGPSKFSYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLSDQKNLVDNHTEDQTETSLASSTQEQLPSQKETDVEKTTADDCLSANQTDKFSPDDSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAPSPNGSMAHACNTSSQSACGPGMTEVHAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELVSQKDPISSSVGNTSTETTHQHVATSNGVPKALVPLMAASMNMINSTALIPGNLAPENGDNKPKIEKEI 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1529 594 MobiDBLite consensus disorder prediction 384 401 - -
Dere01g1529 594 MobiDBLite consensus disorder prediction 1 20 - -
Dere01g1529 594 MobiDBLite consensus disorder prediction 412 427 - -
Dere01g1529 594 MobiDBLite consensus disorder prediction 531 551 - -
Dere01g1529 594 PANTHER TESMIN/TSO1-RELATED 52 512 IPR028307 -
Dere01g1529 594 MobiDBLite consensus disorder prediction 375 447 - -
Dere01g1529 594 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Dere01g1529 594 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Dere01g1529 594 SMART CXC_2 199 240 IPR033467 -
Dere01g1529 594 SMART CXC_2 114 154 IPR033467 -
Dere01g1529 594 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1529 Dere-ChrDere01 28600347 28607936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1529 1 525 CPP Transcription Factor Family AT4G29000 58.152 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dere01g1529 TCR 3.2e-12 No_clan