Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1510 ATGCATTTATGTCTCTCTCCACTTCCTATCCAGCATCGCTATATTCTGCTTCTTCTTCTTCTTCTTCTTCAAAAATCTCTCTTATCTGTCGTACATTCTCTCTGCCTTCCTTCCTTCCGTTACTCTCTGTTTACTCTGATGGAAAACCTTCTCAAAATGCGAATCTCTCGCATGTTCCGATCCTCATTCGGGTCGTGCCGGTCCCGTAACTTCTCCGATGTGACCGAAAAAGCCGTCAATGCCCCTCACAGCCAACGGGGCTTCAACCTCATCGAGCCATTGTCCCCTAAAGCCCGTCCCCTTCCGTCCATTTGCAGACCCAAAGCGTCAGAAACATCCGAAACTATTGATTCGCTTCCGAGAAAGAAAGTTTCGGAGTGGCCGTCATCGCCGTTCATCTGGGGCAATCCCAACGGAAGGTCGTGTCCCCCTGTTTCGCCAATCACGCCTCTGAATCCAATCTACGAGGACGAGTTTGGTTATTGTGAGAAAATGAGAAATTCAGGCAGGAACAAAAGGAGTAAGAAGAAAAAGAAGAAGAAGAAGGATACTCAGAAGAAAAGAAAGCCCTCAAATATGTTCCCATTTAACTCTTGCGCACAAGACTCCAGCTTTGGTGGGTATTGGTGGTATAGCAGCGACGACGACGACGGAGAGGATGAAACAGACACACTTTTCTCTTCTAGAAGCCTCTCTTCTGATTCCTCCCGGTCCCGCCGCCGCCGGCATCGATCTCGCCTGAAGAAGCAGGACGGTGGTCAAGTGGGTTCTGGGAATCGGAGTTCCGAAATGGGTGTGATGCCATTGCAGGGGAAAGTGAAGGATACCTTCGCCGTAGTGAAGCGATCCAGCGATCCTTACAATGACTTCAGGACGTCGATGGTGGAAATGATAGTTGAGAAACGCATATTTGCGCCCAGGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCACTTAATTCCTATAATCATCATAAGATCATTGTTGAGGTTTTCACTGAGATTTGGGAAGCTTTGTTCTCTGACTGGCTTTAA 1035 0.4783 MHLCLSPLPIQHRYILLLLLLLLQKSLLSVVHSLCLPSFRYSLFTLMENLLKMRISRMFRSSFGSCRSRNFSDVTEKAVNAPHSQRGFNLIEPLSPKARPLPSICRPKASETSETIDSLPRKKVSEWPSSPFIWGNPNGRSCPPVSPITPLNPIYEDEFGYCEKMRNSGRNKRSKKKKKKKKDTQKKRKPSNMFPFNSCAQDSSFGGYWWYSSDDDDGEDETDTLFSSRSLSSDSSRSRRRRHRSRLKKQDGGQVGSGNRSSEMGVMPLQGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKRIFAPRDLENLLQCFLSLNSYNHHKIIVEVFTEIWEALFSDWL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1510 344 MobiDBLite consensus disorder prediction 165 198 - -
Dere01g1510 344 NCBIfam uncharacterized plant-specific domain TIGR01568 277 340 IPR006458 -
Dere01g1510 344 MobiDBLite consensus disorder prediction 221 265 - -
Dere01g1510 344 MobiDBLite consensus disorder prediction 169 187 - -
Dere01g1510 344 ProSiteProfiles OVATE domain profile. 279 338 IPR006458 -
Dere01g1510 344 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 153 341 IPR038933 GO:0045892
Dere01g1510 344 MobiDBLite consensus disorder prediction 102 122 - -
Dere01g1510 344 Pfam Transcriptional repressor, ovate 283 340 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1510 Dere-ChrDere01 28424506 28425540 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere01g1510 Ovate 3.6e-25 No_clan