Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1505 ATGGAGCAGAACAACGTGATTGCGCCCTTCGTTATAAAGACGTATCACATGGTCAACGATCCCAGGACCGACACTCTCGTCACTTGGGGGCGAGCTAACAACAGCTTCATCGTCATCGACCCTTTGGATTTCTCGCAGAGGATCTTACCTGCGTATTTTAAGCACAACAACTTCTCTAGCTTCGTTCGTCAGCTCAATACCTATGGATTCAAGAAGGTGGATCCAGATCGATGGGAGTTTGCGAACGAGTGGTTCCTGCGGGGGCAGAAGCAGCTGCTGGTGAATATAGTGAGGAGGAAGCAGACTAAGAATAAGAATAGTGTGTATTACGAGGGGATGGGAGTGAAGCAGGAGGAATTGGACGAGGAAGTGATAGTGATGGAGATAGCGAGGTTGAAGGAGGAGCAGAAGGCGTTGGAGAAGGAGGTGGAAGGGATGAACAAGAGGCTGGAGGCTACGGAGAGACGACCTCAGCAAATGATGGCGATTCTGTGCAAGGTAGTGGAGGATCCTCACGTTCTTTCTCGCATATTGGCGGACAGAGAAGCAAGGCAGCTGGCGGAGAAGAGGCGGCGCTTAATATCAGCCACCACCACCCCCTCTTCCTCATCTTCTTCCGGCATGGCCGTCAAGGCAGAGGTGGAAGAAGACGAGGCAACTGTGGGAGGTATAATATCATCGTCACCGGAAACTGGTTTCGAAGTCCATCATATTTGTCAGTCATCTCCGCCGCAGGAAACGCCGTTCTGGTGGGGCCACAGCCAAGCTTTGGTAGATAGGCCTCCTTGGAAAAATAATAAAAGTCAACAGGGTGGTGGCGACACCGCCGTTCCGACGGCGGTACCAGTGTGGCCGCCTCTGGAAGGGACGTATACGGGATGCCACAGTAACAGTGATGCCCCAATGACGTATTTTACGGAAATGGAGGCGGAGACTCAGAGCAGTTCGCCGCCGCCTTATCCATTTTCGCTGTTGGAAGGTGGCTTTTAG 990 0.5232 MEQNNVIAPFVIKTYHMVNDPRTDTLVTWGRANNSFIVIDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANEWFLRGQKQLLVNIVRRKQTKNKNSVYYEGMGVKQEELDEEVIVMEIARLKEEQKALEKEVEGMNKRLEATERRPQQMMAILCKVVEDPHVLSRILADREARQLAEKRRRLISATTTPSSSSSSGMAVKAEVEEDEATVGGIISSSPETGFEVHHICQSSPPQETPFWWGHSQALVDRPPWKNNKSQQGGGDTAVPTAVPVWPPLEGTYTGCHSNSDAPMTYFTEMEAETQSSSPPPYPFSLLEGGF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1505 329 Coils Coil 122 156 - -
Dere01g1505 329 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere01g1505 329 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere01g1505 329 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere01g1505 329 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 220 IPR027725 -
Dere01g1505 329 FunFam Heat stress transcription factor B-4 2 100 - -
Dere01g1505 329 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere01g1505 329 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere01g1505 329 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Dere01g1505 329 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere01g1505 329 Gene3D - 2 100 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1505 Dere-ChrDere01 28357486 28358576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1505 6 201 HSF AT3G24520 62.000 5.60e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere01g1505 HSF_DNA-bind 2.3e-30 CL0123