Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1493 ATGGCTCATCTCTCCAATGGCCACCACCATCCTGATATCGCCTCCATCAAGTTCACCAAGCTCTTCATCAATGGCCAGTTTGTTGATTCCCTTTCAGGGAAGACGTTCGAGACTATTGATCCAAGAAATGGAGAGGTGATTGCGAGGATCGCCGAAGGCACGAAAGATGATATTGATCTTGCTGTTAAGGCGGCACGTGAAGCCTTTGATTCTGGACCCTGGCCACGCTTGCCTGGCTCAGAGAGAGGAAGAATAATGATGAAGTGGGCAGAGTTGATAGACCAGAACGTAGAAGAACTGGCTGCACTGGACGCCATAGATGCAGGGAAGCAGTACCACTGGTGTAAGGCGGTGGATATACCTCAGGTGGCGAATACTCTGAGATACTACGCAGGGGCTGCGGATAAGATACACGGAGAGGTGTTGAAGATGGCGAGGGAGTTCCAGGCATACACTCTGAGGGAGCCGATAGGGGTGGTGGGACACATCATTCCCTGGAACTTCCCCAGTACCATGTTCTTCGCCAAGGTTAGCCCGTCCTTGGCCGCCGGCTGCACCATGGTCCTCAAACCCGCCGAGCAGACCCCTCTCTCTGCTCTCTTCTACGCTCATCTTGCCAAGCTGGCTGGAATTCCAGATGGTGTGCTTAATGTAGTACCTGGATTTGGCCCGACTGCTGGTGCAGCTATTAGCTCGCACATGGACATTGATAAGGTTAGCTTTACAGGTTCAACAGAAGTAGGACGAGAAGTGATGCAAGCTGCAGCTAAGAGTAATTTGAAACAAGTTTCACTTGAATTAGGAGGCAAATCACCCCTCATAGTATTTGATGATGCTGATGTGGACAAAGCTGCCGAGCTTGCACTCTTAGGAATCGTATTTAACAAGGGAGAAATTTGCGTCGCAGGTTCCCGCGTGTTCGTCCAGGAAGGTATATATGATGAGTTTGAGAGGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTAGTTGGGGACCCTTTTGATCCTGAAGTTAAGCAAGGTCCTCAGGTTGACAAGAGGCAATTTGATAAAATTTTATCGTATATAGAGCATGGAAAGAGAGAAGGAGCCACCTTGTTGACTGGGGGTAAAGCAGTGGGCACCCAGGGATACTACATTGAGCCTACAGTATTCGCTAACGTTAAGGAGGACATGATTATAGCACAAGATGAAATATTTGGGCCTGTGATGGCACTAATGAAGTTCAAAACGATTGAGGAGGCAATAAAAAGTGCGAACAATACAAGATATGGGCTAGCAGCAGGCATAGTGACGAAGAACTTGGACATAGCAAACACAGTGTCGAGATCCATTCGTGCAGGAATAATTTGGATCAACTGCTATTTTGCGTTTGGGAATGACGTTCCTTATGGAGGGTACAAGATGAGTGGATTTGGGAGAGATTTTGGACTGGAAGCCCTTCACAAGTACCTCCAAGTTAAATCTGTTGTCACTCCCATTTACAATTCTCCTTGGCTCTGA 1500 0.48 MAHLSNGHHHPDIASIKFTKLFINGQFVDSLSGKTFETIDPRNGEVIARIAEGTKDDIDLAVKAAREAFDSGPWPRLPGSERGRIMMKWAELIDQNVEELAALDAIDAGKQYHWCKAVDIPQVANTLRYYAGAADKIHGEVLKMAREFQAYTLREPIGVVGHIIPWNFPSTMFFAKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREVMQAAAKSNLKQVSLELGGKSPLIVFDDADVDKAAELALLGIVFNKGEICVAGSRVFVQEGIYDEFERKLVEKAKAWVVGDPFDPEVKQGPQVDKRQFDKILSYIEHGKREGATLLTGGKAVGTQGYYIEPTVFANVKEDMIIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFGNDVPYGGYKMSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1493 499 FunFam Aldehyde dehydrogenase, putative 461 487 - -
Dere01g1493 499 SUPERFAMILY ALDH-like 15 495 IPR016161 GO:0016491
Dere01g1493 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Dere01g1493 499 Pfam Aldehyde dehydrogenase family 28 489 IPR015590 GO:0016491
Dere01g1493 499 FunFam Aldehyde dehydrogenase3 269 458 - -
Dere01g1493 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Dere01g1493 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Dere01g1493 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Dere01g1493 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 16 489 - -
Dere01g1493 499 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 23 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1493 Dere-ChrDere01 28262814 28266165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1493 5 499 Aldehyde Dehydrogenase Gene Family AT3G24503 71.976 0.0 753