Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1487 ATGGGCATGGGGGGGAGCTCCAGCGGGGAGGAACACTCAGTGAACTTCTCGCGCTCAAGAGGGTTCCTCACAAAATTCAAAGTAGGATTGAAGGAAACGTTCTTCCCGGACGATCCCTTCAGGCAGTTCAGGAACGAGACGAAGACGAGCCGGCGAGTGATCAAAGGCCTGCAGTACTTCGTCCCCATCTTCGAGTGGCTTCCCAATTACAATTTCCGTCTCTTCCTCTCCGACTTGCTCGCCGGCCTCACCATCGCCAGCCTCGCCATCCCTCAAGGCATCAGCTACGCCAAACTCGCCGCCATCCCTCCCGTCGTCGGCCTCTACAGTGCCTTTGTTCCACCTCTTATATACACCATTTTCGGGAGCTCAAGGCATATAGCAGTGGGGCCAATAGCATCATGCTCATTGATCATATTTGAGAACATTTCGAGCGTGGTATCTCCCGACACCGACCCAGCCTTGTACCTTCATTTGGTTTTCACCTCCGCCTTTATCACTGGTTTGTTCCAGGCGGCTCTAGGTTTTCTAAGGCTAGGGATATTGGTGGATTTCTTTTCGCATTCAACTATCACAGGCTTCATGAGTGGCACGGCAATCATTCTAATCCTCCAGCAACTTAGGGGCTTATTAGGCCTAAAACATTTCACCACTAAAACCAACGTCCAAGGTGTGATCCACGCCATCTGGCACTACAGATCTGAGATAAGGTGGGAGACTACCGTTCTGGGTCTGCTCTTTCTTATCTTCTTGCAGTTCACTAGATACGTGAAAACCAAAAATCCAAAATTATTTTGGGTTCCTGCTCTGGCTCCGATCATAACAGTAGTGGTTTCTGGTATTTTTACCTACCTTGTCCATGGCCAAAAACATGGAATTGCAATTGTGGGTCACCTGGACAAAGGAATCAACCCTCCCTCTATTAAGTATTTAAACTTTGACTCTCGATATATAAAACCGGTGGCGAAAGCTGGCATTATCACAGGCATTCTATCCTTGGCGGAAGGGATAGCAATAGGAAGAAGCTTTTCTGTGATTGATAATACCCCTCATGATGGAAACAAGGAGATGATAGCATTTGGCCTCATGAACCTTTTCGGTTCTTTCACTTCATGCTACTTGACAAGTGGACCATTTTCGAAAACTGCAGTGAATTACAGCGCAGGGACAAAGACACCCATGTCCAACGTAGTACAGTCTTTCCTTGTTGCACTCACACTCATATTTCTAGCCCCTCTCTTCTCTTACACCCCCATTGTGGCCTTATCTGTCATTATCATATCTGCAATGATTGGCCTCTTCGACTTCGATGAGATGATCCACCTCTTCAAAGTCGACAAGTTTGATTTCCTCATTTGCATGGCTGGCATGTTAGGGGTCGCCTTCATAAGCATGGACGTTGGCCTTCTTCTGTCTTTGGCTCTTGCTGTACTGAGAGCACTCTTGTATGTGGCTCGGCCTGCCACGTGTAAACTTGGAAAGTTACCCGACTCGGGTTTATACCGCGATATGGAGCAGTATCCAAACTCATCAAAGGTCCATGGCCTTCTAATTATACAACTTGGCTCTCCTATTTACTATGCAAACTCCATTTACGTCAAAGAAAGGATTATGAGATATATTCGAAGCGAGCAGGGCGCTGGAGATGTCATTGAGCAGGTCATACTCGATTTGTCAGGAGTGACGTCGATTGATATGACTGGTATCGAAGGACTGCTGGAGACACGAAGATGCTTGGAGAAAAATCATATACAGATATCGATAGTGAATCCAAGACTGGGGGTGATGGAGAAGCTAATTGCATCTCGCTTTGTGGACAAGATTGGGAAGGAGTCATTCTTCTTGACTTTGGATGATGCAGTGATGGCAACTCAATATTCACTTCGCAAAGCCAACAAGGGTGACACGCCTGTCTAA 1917 0.4695 MGMGGSSSGEEHSVNFSRSRGFLTKFKVGLKETFFPDDPFRQFRNETKTSRRVIKGLQYFVPIFEWLPNYNFRLFLSDLLAGLTIASLAIPQGISYAKLAAIPPVVGLYSAFVPPLIYTIFGSSRHIAVGPIASCSLIIFENISSVVSPDTDPALYLHLVFTSAFITGLFQAALGFLRLGILVDFFSHSTITGFMSGTAIILILQQLRGLLGLKHFTTKTNVQGVIHAIWHYRSEIRWETTVLGLLFLIFLQFTRYVKTKNPKLFWVPALAPIITVVVSGIFTYLVHGQKHGIAIVGHLDKGINPPSIKYLNFDSRYIKPVAKAGIITGILSLAEGIAIGRSFSVIDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYSAGTKTPMSNVVQSFLVALTLIFLAPLFSYTPIVALSVIIISAMIGLFDFDEMIHLFKVDKFDFLICMAGMLGVAFISMDVGLLLSLALAVLRALLYVARPATCKLGKLPDSGLYRDMEQYPNSSKVHGLLIIQLGSPIYYANSIYVKERIMRYIRSEQGAGDVIEQVILDLSGVTSIDMTGIEGLLETRRCLEKNHIQISIVNPRLGVMEKLIASRFVDKIGKESFFLTLDDAVMATQYSLRKANKGDTPV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1487 638 NCBIfam sulfate permease 62 620 IPR001902 GO:0016020|GO:0055085
Dere01g1487 638 ProSitePatterns SLC26A transporters signature. 104 125 IPR018045 GO:0008271|GO:0008272
Dere01g1487 638 Pfam Sulfate permease family 75 455 IPR011547 GO:0016020
Dere01g1487 638 CDD STAS_SulP_like_sulfate_transporter 507 617 - -
Dere01g1487 638 ProSiteProfiles STAS domain profile. 506 624 IPR002645 -
Dere01g1487 638 Gene3D STAS domain 486 627 IPR036513 -
Dere01g1487 638 PANTHER SULFATE TRANSPORTER 29 624 IPR001902 GO:0016020|GO:0055085
Dere01g1487 638 SUPERFAMILY SpoIIaa-like 508 621 IPR036513 -
Dere01g1487 638 Pfam STAS domain 507 620 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1487 Dere-ChrDere01 28210528 28214778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1487 6 628 Inorganic Solute Cotransporters AT5G19600 60.995 0.0 792