Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1481 ATGAGGCAGAGACGCCATGAAAAAGCTGCGCAAGTTGAACTATTTCTTCGCCTGCAGCCAAATTCAGAGGTGGAGATGGCAAACCGACTAAAGGAAGATGAGAAGAATGAACGAATTATTCGGGGTCTTCTGAAACTTCAGGCGAATCGCAGATGTATTAATTGCAGCAGCCTGGGACCCCAATATGTGTGCACAAATTTCTGGACATTTGTTTGCACAAACTGTAGTGGAATACACCGGGAATTTACACATCGAGTTAAATCAATTTCGATGGCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCGTGCAAAGGAAATTTATTTTAAAGAATGGGATCCGCAACGCCATTCTCTCCCTGATAGCAGTAATGTCAACAGGCTCCGGGACTTCATTAAGCATGTTTATGTAGATAGAAGATTCAGTGGTGACAGGGCTAACGACAAACCACCAAGAGCTAAAATGGGTGACAAGGATGATTTCTATGAAAACAAAAGAGTTGAGACATATCAGGGGGGATCTAGAAGCCCACCATATGAGAACACATACGAACGTCGTTACAGTGACAAGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGACTCTAAGAGAAGCCCTGGTCGTCCTCCTATTATCAATGACTGGCGTCGTGAAGAAAGATTTGGAGATGGTAGGAGATTTGAAGATCGTAGAATGTCTGATGGAGATTTTAAGCTGGAAGGGCAATCACCTGAGCGAGGCAAAGATCCAGATTCTTCAAGTTCGCCTGTTGTACGGCCTGTTAGAGATATTTTGGGGGAAAATGTTGTACCCCTTCGAATAAGTGAACCTCCTAAAACAAACAGTGGAAGGGCTGCTGAAGGCTCTGCACTCACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCAAGTAATGGAAACACTGCAGAAGTTAAGCTTGAGAGTACTAAGAGCCTTATTGACTTTGATTCTGAGCCTGAACCTCCTGTTGCTCCAGCAAATCCTCAAGCTGAACAAACTACTGTGGCTCAGTCAGTTGTGCAGCCAGCAAATTCTAGTGATGACAACTGGGCATCTTTTGATGTTGGCCCTCAGGCAAAAACAACTCAAACTCCTTCAAATTTAAATCCACTTGAATCTGTGCTGTCACAGTTGTCAGTACCATCACCTGCAGCTGCTCAGGTTTCTGGAGTCCAAGGGCCTCTGCCTGTATCGGCTCTTGCTGCCACTGCTGCTGGAGCTGGAACTGGAACACTTGGCAACTTCTCATCAGTACCACAGAGTGGTGCCTCTGTAACAGCCCCTGGATTGACGACAGTGTCACCTCTTAATGATGTAGGCCAGTGGGCCAGTGTGCAGCATCAACAAGCTGTGTTCCCTACCACTGTTAGTCAGCCTACTACTCAACAATTTATCCCATCAGCAGGTGGATCTTTGAATAATCAGCAGTGGAGTGTATCTCCAGTGCCCACAACACAAGGGCACCCTAGCACAGCAATGCCACATGCATCCCATCTTGTCTCAAAACCTGCCAATGAGGTTAGCTCTGGTGTTCTTTCACAGCCTTCAACAGTAGAAGTACAACCAAGTGGAAGAAGAGAACTTCCTGAGGATCTTTTTACCCTAAAGTATCAATCCTTCCCTTCTTCAGTTCCAGGGTGGCAAATGGGTCCTCCTCCTGGCATGGGTATCTATATGCAATATAGTACTCCAGCGCCCATGCCAAGTTTTCCACAGTCATCAAAATCAACAAATCCATTTGATGTAAGCAGTGAGCCACCTCCGGCTCAAGCCCCAACATTTCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCTAGTATATCGCCTTCTTCAGGTGTAATGCACCCTTCAAGCCTGGGTAATCCATCACTTTCCTGGAACTCACCCCAGTCACCAATATATGGATCAGTAGTACCCCGTCAGGCACAAGTTCATGCATCACCAATGGCACCAAGGGCATACATGGGGCAACAGATGCCAAGTAACATTCCGATGCCAAGGCATCAAGAAATTGGGAATTCTGGTACCCAGGGAGCTGCTTTTGGCTTCTCAAATCCAGGTCAGCAGAAGTCTGGTATGTTCTCAACCCCTGCTGCTGCAAATTCCTTCCCTTCTGGAGGGAACCCCTTTGGATGA 2199 0.4638 MRQRRHEKAAQVELFLRLQPNSEVEMANRLKEDEKNERIIRGLLKLQANRRCINCSSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSSNVNRLRDFIKHVYVDRRFSGDRANDKPPRAKMGDKDDFYENKRVETYQGGSRSPPYENTYERRYSDKSSPGGRSPGYDQESRQYGDSKRSPGRPPIINDWRREERFGDGRRFEDRRMSDGDFKLEGQSPERGKDPDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGRAAEGSALTQRTASSSSLASSNGNTAEVKLESTKSLIDFDSEPEPPVAPANPQAEQTTVAQSVVQPANSSDDNWASFDVGPQAKTTQTPSNLNPLESVLSQLSVPSPAAAQVSGVQGPLPVSALAATAAGAGTGTLGNFSSVPQSGASVTAPGLTTVSPLNDVGQWASVQHQQAVFPTTVSQPTTQQFIPSAGGSLNNQQWSVSPVPTTQGHPSTAMPHASHLVSKPANEVSSGVLSQPSTVEVQPSGRRELPEDLFTLKYQSFPSSVPGWQMGPPPGMGIYMQYSTPAPMPSFPQSSKSTNPFDVSSEPPPAQAPTFPSMSSLQGALPSISPSSGVMHPSSLGNPSLSWNSPQSPIYGSVVPRQAQVHASPMAPRAYMGQQMPSNIPMPRHQEIGNSGTQGAAFGFSNPGQQKSGMFSTPAAANSFPSGGNPFG 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1481 732 FunFam Arf-GAP domain and FG repeat-containing protein 1 26 160 - -
Dere01g1481 732 CDD ArfGap_AGFG 37 147 - -
Dere01g1481 732 PANTHER ARFGAP/RECO-RELATED 26 732 IPR044820 GO:0005096
Dere01g1481 732 MobiDBLite consensus disorder prediction 224 261 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 589 645 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 689 732 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 148 390 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 689 724 - -
Dere01g1481 732 PRINTS HIV Rev interacting protein signature 68 85 IPR001164 GO:0005096
Dere01g1481 732 PRINTS HIV Rev interacting protein signature 86 107 IPR001164 GO:0005096
Dere01g1481 732 PRINTS HIV Rev interacting protein signature 49 68 IPR001164 GO:0005096
Dere01g1481 732 Pfam Putative GTPase activating protein for Arf 38 148 IPR001164 GO:0005096
Dere01g1481 732 SMART arf_gap_3 40 155 IPR001164 GO:0005096
Dere01g1481 732 Gene3D Arf GTPase activating protein 26 157 IPR038508 -
Dere01g1481 732 SUPERFAMILY ArfGap/RecO-like zinc finger 36 148 IPR037278 -
Dere01g1481 732 ProSiteProfiles ARF GTPase-activating proteins domain profile. 37 155 IPR001164 GO:0005096
Dere01g1481 732 MobiDBLite consensus disorder prediction 589 605 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 615 645 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 299 328 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 148 172 - -
Dere01g1481 732 MobiDBLite consensus disorder prediction 348 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1481 Dere-ChrDere01 28161351 28169053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1481 37 147 C2H2 Transcription Factor Family AT4G21160 33.333 7.94e-12 65.5