Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1459 ATGAATATCCACGACGAACAGCCCCACACTCTTGATAGAGCAAGCATCAAGGGCCTTCTTTTGGACATGATCATTGGTCTTTCCGAAACGGCAATCACTGTCATCGAGTGGGCCATCTCGGAACTCCTTCGGCATCCACGTATCATGCTAAATCTTCAAAAAGAGCTCACAACCATAGTCGGAATCAACAAAATGGTGGAAGAAGCTGATTTAGCCAAACTAAGCTACTTAGATATGGTTGTGAAGGAGACCTTAAGACTGTACCCTGTGATACCATTACTGGCACCTCATGAGTCCATGGAAGACACAGTGATCAAAGGCTATCACATAAAGAAGAAGTCAAGAATAACCATAAATGTGTGGGCAATAGGGAGAGACAAAAAGGTGTGGTCAGATAATGCAGAGATGTTTTATCCTGAGAGGTTCGTTAATAGCAACATAGATGTTAGAGGGACGAACTTCGAGCTGATACCATTCGGGTCGGGTCGTAGAAAGTGCCCCGGAATACTTTTGGGGATGACAATAGTGAAACTTGTGGTGGCTCAGTTAGTGCATTGCTTCAACTGGGAGCTTCCTTATGGGATGGTTCCAGAAGAAATGGATATGAGTGAGAAATTCGGGCTTTCTATACCCAGAGCCAAGCATTTGCTTGCTGTGCCTACTTACCGTCTGCTTCATGAAACATAA 687 0.444 MNIHDEQPHTLDRASIKGLLLDMIIGLSETAITVIEWAISELLRHPRIMLNLQKELTTIVGINKMVEEADLAKLSYLDMVVKETLRLYPVIPLLAPHESMEDTVIKGYHIKKKSRITINVWAIGRDKKVWSDNAEMFYPERFVNSNIDVRGTNFELIPFGSGRRKCPGILLGMTIVKLVVAQLVHCFNWELPYGMVPEEMDMSEKFGLSIPRAKHLLAVPTYRLLHET 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1459 228 PRINTS E-class P450 group I signature 35 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PRINTS E-class P450 group I signature 166 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PRINTS E-class P450 group I signature 15 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PRINTS E-class P450 group I signature 78 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PRINTS E-class P450 group I signature 156 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 SUPERFAMILY Cytochrome P450 4 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PANTHER CYTOCHROME P450 93A3-LIKE 6 224 - -
Dere01g1459 228 Pfam Cytochrome P450 6 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 159 168 IPR017972 GO:0005506|GO:0016705
Dere01g1459 228 Gene3D Cytochrome P450 1 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PRINTS P450 superfamily signature 26 43 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PRINTS P450 superfamily signature 79 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 PRINTS P450 superfamily signature 157 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1459 228 FunFam Predicted protein 24 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1459 Dere-ChrDere01 27765387 27766073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1459 11 225 Monolignol Biosynthesis Gene Families AT4G36220 50.926 5.61e-76 236