Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1442 ATGTTCCTTATTGGTGGGCCCTCGGACAGGGAGGGAGGCAAAACGTGTCAACGTCTGGCTGCATCGTCAGGATGGATTCTCCTGTTTCGGTGCAGCGACGTATGCACTGAATCAGGTCTAATTGTTCTGGCGGTTTCTTCTCTTCCATCTTCAATTTCAAGGCTTTACGTGCTCAGGAACCTAGGAATGAATCCCCAATCTGATAACCACCATACAGAGCTCGGAGAACCAGACAGCCTAAGTGCCATTTCCAGTGGAACTAATTATACGCATTCAGTATCCATTCATGGTGAGATTGAAGCCAAACATCGAGTGATCTTGGTTAAGTGGTTAAACAATCTTCTTCCTTCATTAAACTTACCAAAGAATATTAGGGATGAAGAGTTAAGAGAATGCCTGCGTGACGGCACAGTTCTATGTCAGATATTGAACAAGCTACGGCCCGGTTCTGTGAATGTGGTTAATGATTCTGATCAGTCTTCACCGCCAAACTCAGAAAATGTCAAAAGGTTTCTGGCAGCCGTGGAAGGTTTGGGGTTGCCCCAGTTTGAAGCATCAGACCTAGAGAAGATGCGTGGATCTTTAAAGGATGTTGTGGGTTGCCTTTTAAAGATTCGGAGTTTGCAGAACTCTCTGGGAGATGATAATATTTCTGTAATTAGTGCAAAATCTGATAACTTCCGCGGAAATACATCTCACAATTCTCCAACATCAGGAGAAGAGCATAGGAAGGTTTCGTCTGAGTCAAAGTTACAACGTGTATTGCGTAGCGCGGGTATCGGCAATTGCTTTTACCCAGCTCCAGAGTCATCAGGTGCTTTTACGCATCATGTTGGGCATAGGTTCCATGAAACACATAAGTTCCATGAGGTTGTGCATGAGATTGAGCGACGTATAGCAGTTCAGGCAGAACATTTACGAACTCAAAACAATCTTTTCAAGGCTCGTGATGAAAAATATCAATCAAGAATCAGAGTTCTTGAAGCACTTGCATCTGGAACTAGAGAAGAGAGTGAGATGGTTGCAAGCCAGCTTCAGCAGTTGATGGCTGAGAAGACCATGGTGGAAGAAAAGAAGAAGGCTGATGAGGAAAATCTTATTAGGTTGTTGGAAGAGAAGGACCACCTAAGTACGGAACTTTCAACATTGAAGCAAGAACTGGAAACAACAAAAATAACTTGCTTACAGTTGGAAGCAGAAGCTGCGGGTGCTAAAGGAGAACTGAAACAGAAGTCAAAAGATTATGAGCTCCAATTGGAAGATTTAACAAACAAGGTGAAAGAACTTGAGGCTTGTTCTGATTCAAAATATCAAAAGTGGAACTTGGAGAAGAACCAATTGCAGAATGCTGTAGATTTTCAATATAGTTCACTACAGAAAATAAAATTGTCTTGGCAATCCATTATGCAAGAAGTCATGAAAGAGCAAAAGATGTACATGGAGGAATGCAATCGATTAGGTGTAAATCTTCAACCATTAATAGATGCAGCCAATAAATATCAGGATGTTCTTGCTGAAAATCGAAGACTGTTTAATGAAGTTCAAGAATTGAAAGGAAATATCAGAGTATATTGTCGAATCAGACCATTTCTTCCTGGACTCAAGGAAAAACGGTCTATTGTAGAACATAGTGGTGAAAATGATTTGGTTGTAGCAAATCGCTTGAAACAAGGGAAAGAAGCTCTTCGAACGTTTAAGTTCAATAAGATCTTTGGTCCAGCTGCATCTCAAGCGGACGTATACTCTGATATTCAACCCTTTATACGATCAGTACTTGATGGGTACAATGCATGCATATTCGCTTATGGCCAAACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCTAATGGAGCAACAACGGAGAGTTATGGTGTTAATTACCGAGCTCTAAATGACCTCTTCAGCATTTCCAGCGGTAGAACAGGCTCCATAGTGTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAACAAATATTGACTCACTCTCATCCCAAGGGCTTAGCTGTACCTGACGCTAGCATGTTCGTTGTTAAATCAACTTCAGATGTTTTGATGCTAATGGACATTGGATTGAAAAATAGAGCCATGGGGGCCACGGCTATGAATGAAAGAAGTAGCCGCTCTCACAGTGTGGTCTCAATTCATGTTAGTGGGAAAGATTTACATTCTGGTTCTGCTCTGCATGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGCAACTGGGGATAGGCTTAGGGAAGCACAGCATATAAACAAGTCACTATCTGCCCTTGGAGATGTCATTTTTGCTCTTTCACAAAAGAGCCCCCATGTACCATATAGAAACAGCAAACTTACTCAACTCCTGCAAAGCTCTCTTGATGTAAATTCATTTTCTGAAAGTCTGAGTACCTTAAAGTTTGCCGAGAGGGTCTCTGGAGTTGAGTTAGGAGCTGCACGAAGTACTAAAGAGGGCAGAGACGTTAGAGAACTGATGGAGCAGTTGGCTTCTCTCAAGGACATTATTTCTAAAAAAGATGAGGAGATTGAGCTGCTACAATTACTTAAAGATGTCAAAAATGTCAGTTCTGAGAAAGCCTATTTGAGGTATGGATCTCCCTATACAAGCAGAGATTCTATAGGCAATACTCCTAAGCGTGACCATAAAGCATCAGGGGAAAGAAATATGCAATCTGAGGCCCATTTCCAGCAGCCAATGGATGGCCTAAGACAAGAAGATGAAATTTTCCAGTTTCCCAAATTTGCTGGGACTAGTCCTATAAGAGCTGATATTTTTCGAATTGCAAATGAGGATTATGGTGGAAGACGAAGCGACTTTTCCGAGGGTGGCCTTCTGGGAACAGACACCGATGATTTGTTTGATAATAAAGTTCTCACTGAAATCAAGAAATCGCCATATCGCACGGTGAAATCAAAAACAGTGCCGAAAGTTGGTGGAGGACTCATGGGTCAGAAAAGTCCTGCAAGGGCAGACATTTTTCGACACGCGAGTGCAGATTATGGTGGAAGACTAAGTGACTTCGCCGACCGTGGCCTTTCTGTGGGAACAGGAACTGATGGTTTCTCCAATCACAAAGCTCTCACTGAAAATTTAAAATCACCACGTCGCACGGTGAAATCAAAAATAGCATCGAAAGTTCCTCAAGTCTCGCCGAAACGGAGCCAACCCACATCTACCACGGTTGCACTCACAAAGGATACAATGAAGAAGTCCCCAAGTATTAGAAGAAGCATCAGTAGTGGCCATATAAAAGATAAACTCAACCCACAGAAAGGCGTCAAAAGGCCTTGA 3324 0.4221 MFLIGGPSDREGGKTCQRLAASSGWILLFRCSDVCTESGLIVLAVSSLPSSISRLYVLRNLGMNPQSDNHHTELGEPDSLSAISSGTNYTHSVSIHGEIEAKHRVILVKWLNNLLPSLNLPKNIRDEELRECLRDGTVLCQILNKLRPGSVNVVNDSDQSSPPNSENVKRFLAAVEGLGLPQFEASDLEKMRGSLKDVVGCLLKIRSLQNSLGDDNISVISAKSDNFRGNTSHNSPTSGEEHRKVSSESKLQRVLRSAGIGNCFYPAPESSGAFTHHVGHRFHETHKFHEVVHEIERRIAVQAEHLRTQNNLFKARDEKYQSRIRVLEALASGTREESEMVASQLQQLMAEKTMVEEKKKADEENLIRLLEEKDHLSTELSTLKQELETTKITCLQLEAEAAGAKGELKQKSKDYELQLEDLTNKVKELEACSDSKYQKWNLEKNQLQNAVDFQYSSLQKIKLSWQSIMQEVMKEQKMYMEECNRLGVNLQPLIDAANKYQDVLAENRRLFNEVQELKGNIRVYCRIRPFLPGLKEKRSIVEHSGENDLVVANRLKQGKEALRTFKFNKIFGPAASQADVYSDIQPFIRSVLDGYNACIFAYGQTGSGKTYTMSGPNGATTESYGVNYRALNDLFSISSGRTGSIVYEIGVQMVEIYNEQILTHSHPKGLAVPDASMFVVKSTSDVLMLMDIGLKNRAMGATAMNERSSRSHSVVSIHVSGKDLHSGSALHGNLHLVDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQSSLDVNSFSESLSTLKFAERVSGVELGAARSTKEGRDVRELMEQLASLKDIISKKDEEIELLQLLKDVKNVSSEKAYLRYGSPYTSRDSIGNTPKRDHKASGERNMQSEAHFQQPMDGLRQEDEIFQFPKFAGTSPIRADIFRIANEDYGGRRSDFSEGGLLGTDTDDLFDNKVLTEIKKSPYRTVKSKTVPKVGGGLMGQKSPARADIFRHASADYGGRLSDFADRGLSVGTGTDGFSNHKALTENLKSPRRTVKSKIASKVPQVSPKRSQPTSTTVALTKDTMKKSPSIRRSISSGHIKDKLNPQKGVKRP 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1442 1107 SMART ch_5 103 208 IPR001715 GO:0005515
Dere01g1442 1107 Pfam Kinesin motor domain 526 801 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g1442 1107 SMART kinesin_4 518 826 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g1442 1107 Gene3D - 94 213 IPR036872 -
Dere01g1442 1107 PRINTS Kinesin heavy chain signature 702 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g1442 1107 PRINTS Kinesin heavy chain signature 594 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g1442 1107 PRINTS Kinesin heavy chain signature 782 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g1442 1107 PRINTS Kinesin heavy chain signature 733 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g1442 1107 MobiDBLite consensus disorder prediction 1054 1089 - -
Dere01g1442 1107 MobiDBLite consensus disorder prediction 225 246 - -
Dere01g1442 1107 ProSiteProfiles Kinesin motor domain profile. 520 832 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere01g1442 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 856 IPR027417 -
Dere01g1442 1107 PANTHER KINESIN-LIKE PROTEIN KLP-3 364 1050 IPR027640 GO:0003777|GO:0007018
Dere01g1442 1107 MobiDBLite consensus disorder prediction 1044 1107 - -
Dere01g1442 1107 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 462 820 - -
Dere01g1442 1107 MobiDBLite consensus disorder prediction 1090 1107 - -
Dere01g1442 1107 Pfam Calponin homology (CH) domain 104 206 IPR001715 GO:0005515
Dere01g1442 1107 SUPERFAMILY Calponin-homology domain, CH-domain 98 217 IPR036872 -
Dere01g1442 1107 ProSiteProfiles Calponin homology (CH) domain profile. 101 210 IPR001715 GO:0005515
Dere01g1442 1107 Coils Coil 832 868 - -
Dere01g1442 1107 MobiDBLite consensus disorder prediction 879 898 - -
Dere01g1442 1107 Coils Coil 500 520 - -
Dere01g1442 1107 Gene3D Kinesin motor domain 462 820 IPR036961 -
Dere01g1442 1107 Coils Coil 345 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1442 Dere-ChrDere01 27575549 27583365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1442 500 861 Calmodulin-binding Proteins AT5G65930 34.271 3.57e-57 214