Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1426 ATGGTAACAACTAATCCAAGTCGTTCACTCGACCTTTATAACCCAAGAGCAATCCCAACCCCTAGGGTTTTCACTATACTGCGAAAACATTCCACGGGGTCTCGCCCTTTCGCAGCAGATCTATCAGGGGCTTCCAACTTCCTGAGAGTTGCGAAGATGTACACATCAAGGAAGAAAATTCACAAAGATAACGATGCTGAGCCAACTGAGTTTGAAGAGTCAGTTGGACAGGCATTCTTTGATTTGGAGAATACCAACCAAGAGCTGAAAAGTGATTTGAAAGATCTATACATAAATTCGGCAGTCCAAATTGATGTAACTGGAAACCGCAAGGCTGTGGTTATTCATGTTCCCTACAGATTGAGAAAGGCTTTCCGGAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGGAAGGATGTAATCTTGATTGCCACCCGGAGGATATTGAGGCCTCCAAAGAAGGGTTCTGCTGTGCAACGTCCTCGAAGCCGTACACTCACTGCTGTGCATGAGGCAATGCTGGAGGACGTTGTATTGCCTGCCGAGATTGTTGGGAAGCGTGTTAGGTATCGAGTAGATGGATCTAAGATTATGAAGGTTTTCTTGGACCCTAAGGAGCGGAACAACACTGAGTACAAGCTTGAGACTTTCGCTGCAGTATACAGGAAGCTGTCGGGCAAAGATGTTGTGTTTGAGTATCCTATCACTGAGGCTTAA 732 0.4536 MVTTNPSRSLDLYNPRAIPTPRVFTILRKHSTGSRPFAADLSGASNFLRVAKMYTSRKKIHKDNDAEPTEFEESVGQAFFDLENTNQELKSDLKDLYINSAVQIDVTGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPITEA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1426 243 PANTHER 40S RIBOSOMAL PROTEIN S7 53 242 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dere01g1426 243 Pfam Ribosomal protein S7e 59 238 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dere01g1426 243 ProSitePatterns Ribosomal protein S7e signature. 131 144 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1426 Dere-ChrDere01 27445986 27449972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1426 53 243 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 78.534 4.54e-114 323