Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1424 ATGAGGTTTCTGTGTAGCTTTTGCTCTTGCTTAGAGAAGAGGCTAAAGGCTCGAGGTGAACAATCGTACGATGGGTCGGGCACTTGGGACCTCTTGTTCGACCTCCACACTCTGCAACTAGCCACCAATTTCTTCTCAGAGTTGAACCAGTTGGGACATGGAGGCTTTGGTCCTGTCTATAAGGGGCTGCTGCCTAACGGTCAAGAAGTTGCTGTGAAGAAGCTGTCAATAGACTCCAGACAAGGTGTTAGGGAATTCACCAATGAGGTCAAACTATTACTCAGAGTTCAGCACAAGAACTTGGTTACACTACTCGGTTGTTGCGCTGAAGGACCTGAAAAGATGCTTGTTTATGAGTATCTCCCGAACAAAAGCCTTGACCGATTTCTATTTGGTAATGATCTTTCAACCAGACGCAGACTAAGATATGCAAGACTTTATAATTCTCTTTCTTTTTCTACAGATGTTTTTAGCTATGGAGTCTTGGTGTTAGAGATTGTTAGTGGGAGAAAAAACCATGACGAGAAGCTTGGTGAAGAAAAGGCAGATCTTTTAAGCTATGCATGGAAACTATACGAGGGAGGGAAGGTTCATGATTTAATTGATTCAACCCTTGAGAAATACGATGGTGATGAGGTATCAATGTGCATTCAGCTGGGTTTGTTGTGCTGCCAAGCAAGAGTAGCAGAAAGACCTGACATGAATTCTGTTAATCTGATGCTCTCAAGTGATTCATTTACTATGGCCAGACCATCTAAACCAGGAACTGAAGGCCGTGGTGGACGTTGGACTACAACCACTTTTACCAAGTCTAGTTTTGCAGAGGATTTTTCTGTAAATGACATCTCCACTTCTTCTTTTAATGAAGGCAGATGA 876 0.4292 MRFLCSFCSCLEKRLKARGEQSYDGSGTWDLLFDLHTLQLATNFFSELNQLGHGGFGPVYKGLLPNGQEVAVKKLSIDSRQGVREFTNEVKLLLRVQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDRFLFGNDLSTRRRLRYARLYNSLSFSTDVFSYGVLVLEIVSGRKNHDEKLGEEKADLLSYAWKLYEGGKVHDLIDSTLEKYDGDEVSMCIQLGLLCCQARVAERPDMNSVNLMLSSDSFTMARPSKPGTEGRGGRWTTTTFTKSSFAEDFSVNDISTSSFNEGR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1424 291 Gene3D Transferase(Phosphotransferase) domain 1 121 251 - -
Dere01g1424 291 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 138 - -
Dere01g1424 291 FunFam Cysteine-rich receptor-like protein kinase 2 13 120 - -
Dere01g1424 291 Gene3D Phosphorylase Kinase; domain 1 7 120 - -
Dere01g1424 291 SUPERFAMILY Protein kinase-like (PK-like) 33 253 IPR011009 -
Dere01g1424 291 ProSiteProfiles Protein kinase domain profile. 45 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1424 291 Pfam Protein tyrosine and serine/threonine kinase 48 137 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1424 Dere-ChrDere01 27414614 27416978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1424 14 134 Receptor kinase-like Gene Family AT4G04570 57.377 6.30e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere01g1424 PK_Tyr_Ser-Thr 4.1e-16 CL0016