Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1411 ATGGCTGCCAAACGGTTTCTCGATGATTCCGATCACGACCCTGATAAGCGGAGCGATAAACGGATGAGAACCACTCGACCTTCTTTTGCTTCGATAATAGGAGAAGTGGTTAAGGTGAAGAACATGGAGAACCTGTTCTCATCCTTGGAGCCCTTGCTTAGAAGAGTGGTGACTGAAGAGGTGGAACGAGTATTGAGGCATTGTTGTCCTCGTTCGATTACTCGGTCTCCTTCATTGAAGATTGAAGCATTAGAACGGCCACAGTCAAGCCTTCAACTAATGTTCAGCAAGAAGCTTTCCCTTCCAATATTCACAGGCACAAGGATACTGGACAGCGATGGGAACCCCATCCAAGTGATTCTTGTTGAGAAGAACGGGGACCACATAGTTCGAACCAGTCTACCCCAACCCATCAAGCTGGAACTGCTGGTTCTCGACGGAGACTTCCCGGCCGGCGACAAGGAGGCTTGGACCACCGACGAGTTCAACAGACACATAGTGAAGGAGAGGACCGGGAAACGACCCTTGCTCACCGGAGAACTCAACCTCACCATGAGGGATGGGATTGCACCGACTGGGGACATTGAGTTCACCGACAATTCTAGCTGGATTCGCAGCCGGAAGTTCCGAGTCGCCGTCCTAGTCGCTCCGGGGAGCAACTTTGGAGTTCGGATTCGTGAGGGCATGACTGAGGCGTTTATCGTCAAGGACCATCGTGGAGAATTGTACAAAAAGCACTATCCACCAATGTTGCACGACGATGTGTGGCGGCTGGAGAAGATTGGGAAAGATGGAGCTTTCCACAAGAAGTTGTCCGCAGAGCGTATTCACACAGTACAGGACTTTCTCAAGTTGTACGTTGTTGATTCTCAGAAGCTCAGAAAGATTTTAGGGATTGGGATGTCAGAGAAAATGTGGGAAGCAACTGTCAAGCATGCAAGAACTTGTGAGATGGGCAACAAGCAGTACATTTACCGTGGAACCAATTTTGCCCTTTATTTAAACCCAATTTGCCAATTGATTAAAGCTGAAATGAACGGCCACATCTTTTGGGGCAAAGAAATCATCAATAACATGAATAAGACCTATATCGAGAAACTGGTGAGAGAAGCATACACTAGATGGAATTGCTTGGACGAAATTGATGGACTTCTGAATAACGACATTGCCTTACTAACTCAAGAAAGCTTGACTGGCGAAAGTGTGGAGCAAGAAACAAGCAACAACCATCAAGCAACGATGACAACTTACTATCAAACCGATTTCTTTGGAGAGAAATCTGCAGAGGTTGGAAGCTATGGAACAAACAATGCACAACTTGTTGGATGCAGCGAGTGGACATCGAATCCAACATTCTCGTCAACATCATTCGTGAATGGCATTTCCTATAGCTTCTCAGACTAA 1404 0.4687 MAAKRFLDDSDHDPDKRSDKRMRTTRPSFASIIGEVVKVKNMENLFSSLEPLLRRVVTEEVERVLRHCCPRSITRSPSLKIEALERPQSSLQLMFSKKLSLPIFTGTRILDSDGNPIQVILVEKNGDHIVRTSLPQPIKLELLVLDGDFPAGDKEAWTTDEFNRHIVKERTGKRPLLTGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVLVAPGSNFGVRIREGMTEAFIVKDHRGELYKKHYPPMLHDDVWRLEKIGKDGAFHKKLSAERIHTVQDFLKLYVVDSQKLRKILGIGMSEKMWEATVKHARTCEMGNKQYIYRGTNFALYLNPICQLIKAEMNGHIFWGKEIINNMNKTYIEKLVREAYTRWNCLDEIDGLLNNDIALLTQESLTGESVEQETSNNHQATMTTYYQTDFFGEKSAEVGSYGTNNAQLVGCSEWTSNPTFSSTSFVNGISYSFSD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1411 467 PANTHER OS02G0177800 PROTEIN 1 417 IPR012416 GO:0005516
Dere01g1411 467 Pfam Calmodulin binding protein C-terminal domain 321 381 IPR046829 -
Dere01g1411 467 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
Dere01g1411 467 MobiDBLite consensus disorder prediction 1 24 - -
Dere01g1411 467 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1411 Dere-ChrDere01 27260608 27263904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1411 3 383 Calmodulin-binding Proteins AT5G57580 50.390 4.29e-125 376