Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1401 ATGGCAGACGGAGATGTGAGCGAACAAAGGAGACCACCAGAGGCGAACCAACTGAGAAGTGTACCTGGCTTATTGCTTGCCAAGTTACAATCTGAAGAAAGAACAAAAGAGAGAGGCTCTGTCCGCACAACAATGCCCTATAATCATAAGTACTCCATTGCTGATTGCTCAGTATTGGTTAAGCTATCCCATGGAGTCGAAATTCTGCCTGCAAAGTCAAGAGCAAAGGGACTTACAGTGAAGAAGATTCGAATACCATGCCTAGGATGTGCGCAATATGGGAATCTTGAACAGAGACAGAAGTACTCTGGCAACGAGCATGGCGAACAACATGAGAATGGGAAGCCAGAGTTACTGGGGAGCTTTGATGGTTTGTCCCGAAGCAATTATTGGATCAACTCAGGTGCACACTTAATTGGTGTCTCCCATTGCCCATCATTCTCAAACCGTCTGCACAACTTTATTGGTAAGGGTGATGAAGACCCAACTCTAAACAGTGAATGTGCAACAAATCTCAGAAAATTTAAGTGCAAGACCATCAATCATAATACCACACTTGTTGAGATAGACCCTGGAAGCCACAAGACATTTGATCTTAGCTACTATGTTCATGTATTTAAGAGCATGGGTCTTTTCCAATCAGATGCTGCGTTGTTGACAAACTCAGTTACAAAATCTACCATCACCCAACTTCTTCAGGGTTCTCTTGAGAATTTCATTACTGAATTTTGCCCAGAAATAAAGCCCCTAAGATACCTTCGAGTGGTAATATGTTTAATTTTGATGTTCGGCTCCGTAGATACAGTGTGTGGTTGA 816 0.4277 MADGDVSEQRRPPEANQLRSVPGLLLAKLQSEERTKERGSVRTTMPYNHKYSIADCSVLVKLSHGVEILPAKSRAKGLTVKKIRIPCLGCAQYGNLEQRQKYSGNEHGEQHENGKPELLGSFDGLSRSNYWINSGAHLIGVSHCPSFSNRLHNFIGKGDEDPTLNSECATNLRKFKCKTINHNTTLVEIDPGSHKTFDLSYYVHVFKSMGLFQSDAALLTNSVTKSTITQLLQGSLENFITEFCPEIKPLRYLRVVICLILMFGSVDTVCG 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1401 271 PRINTS Plant peroxidase signature 128 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1401 271 PRINTS Plant peroxidase signature 204 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1401 271 PRINTS Plant peroxidase signature 188 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1401 271 PANTHER PEROXIDASE 25-RELATED 123 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1401 271 Gene3D Peroxidase, domain 2 116 245 - -
Dere01g1401 271 Pfam Peroxidase 134 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1401 271 ProSiteProfiles Plant heme peroxidase family profile. 124 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1401 271 SUPERFAMILY Heme-dependent peroxidases 134 244 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1401 Dere-ChrDere01 27127975 27133572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1401 124 255 Peroxidase AT1G05260 53.030 5.90e-42 144