Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1383 ATGGATCCACCTCAGCCTTTAGCGGCACCCCTCCCCACCACGGCAGCTCCGACCACCACAAACGCCACAACCATCCAACTAAACTACCCAGAGTCAGTGGAGTCTTCTCCTCGCTCCCGCATTGTTGAAAACTGGGTTGATGAGCCCCTCCCTCTTGTTCCTGGAGCCAAGCTTCGCTTGATGTGCAGCTATGGTGGTCATATCATGCCACGTCCACATGACAAGACTCTTTGCTACGTCGGCGGCGACACCCGTATCGTCGTCGTCGACCGTCATTCTTCCCTCAAGGACCTCTGTGGTCGCCTCTCTCGTACCTTGCTCGATGGCCGACCCTTCACCATCAAGTACCAGCTACCCCATGAAGATCTTGACAATCTCATATCAGTCACCACCGACGAAGACTTAGAGAACATGATCGAAGAACATGACCGTTTAACGGCGGCTTCTCCTCCTAGGCCGTCAAGGATAAGGCTTTTTCTGTTTTTCTCTAAGCCAGAGGCTAGTGTTTCGATGGGTTCACTTCTTGATGATGCCAAGTCAGAAACGTGGTTCGTGGACGCTCTTAACAACTCTGGGATTCTCTCGCGGGGTTTGTCGGATTCTGCGGCTGTTGATTGCTCCGTGGTGAACCTTGATAGGGTTCCTGCTAGTGATTCCAGCAACAATTTGGAGGCTCAGGCTGATAACAACAACAAACAGGTCAAGAATTTGCCTGATGTGCATTCCATGCCTAACTCGCCTTTGGTGGAGAACAGTTCATCATATGGCTCTTCTTCTTCATCCCCTTCAATGGCTAATCTGCCTCCAATTCGGGTTCGTGTTGATGAAGATGGTAACAGCAGGCTGCAGCAAGAGCAGAGGCCAGGGATTGAGGAGCAGTTCGCGCAAATGACCTTTGCTGCCAGTGGGATGAAGCAAGATGATGGGTATAATTTGACCATGTTGTCTGTTCCTATGCCTTCAATACCTGCGCCTGCGGCAATGGCATCAACAGCGATGGTGACTGGCGATAATATGAATCGGGTCATCTCTGACGACGAGAGATCAGATCAGGGAGCATCTGCTGGGCTTCGGAAGCCCCCATTACCTTTGCAGCTTGTGCAGCCAAGGACTAATGGTGGTTTAAGTTTGCCTTCACCGGATTCAATTGCAAGTGATAGCAGTATTGCATCTGCAAACTCTTTCACAAGGTCTGTTTACTATCAAGACCAAGTCCAAGCTGCATATGTAGACCCCAAAGCATCCGCTTTATCTCATACCAAGACTGACATATCTGATCCCCACCCTGGATACCCCAGAGAACGTGTTCAGGATTCAAATTACACATTACCTCCACAATTGGATCAAAATCAGCAAATCCAGCAGCCACAACAACTACAACAACAACAATTTGTTCCTGCGAGCACCCACTACATCCACCACCCTGCAGCCACTGGTCCAGTTCCAATGTCTTCCTACTACCCAGTTTATGCCCCACCATCACAGCAGCAAATTCCTCATCCAATCAATCAGCAGTACCCAGTTTATGTAATGCCTGTAGGACACACGCAACCTTACAATATCACTGTGCAACCCAATATGGCTGCTGACCCTAGTGTGTTAGCCTCAGGCAGGCCACCAATACCCCACAGTGCTGCTGGTACCCCACCCATTTACCCCTCTAAGTCAGCCACCCCTACCATACCTGAGGTGGCTCAAACTGTGTACAAAGCACCTGTACCATCCACTCCGGCATATGTTCAAATACCTTCCGGGCAATTTCAGCAACAGCAGTATGTGGGTGTGCCTCAAATCCATCACCAACCACAGTCCATAGCTGTTGCTTCTTCTGCTGCTGCTACTACAACTTATGGTTATGATTATGGTGGACCTGCACAAGACCAAGCATATCACACACCCCAGCAGCAAACTACTCCGTTGCCTCCTCAGTACCAATCCATGACCCCAGCAGCCGCGGCAGCAGCACTGTCAGATGCTTCAAAGCAATTTCCTGCAGAGAGCATTCAGCAACCAAACAGAACTACACAGCCATCTGAGCTTCCTAACGTAAAGGTAATCGAAAATGTGGATGTTCATTTTCCTAGAAGAAAGCAGCAGTTGAGTAAAAAACTGAAATCTGAAGTTTAG 2127 0.4946 MDPPQPLAAPLPTTAAPTTTNATTIQLNYPESVESSPRSRIVENWVDEPLPLVPGAKLRLMCSYGGHIMPRPHDKTLCYVGGDTRIVVVDRHSSLKDLCGRLSRTLLDGRPFTIKYQLPHEDLDNLISVTTDEDLENMIEEHDRLTAASPPRPSRIRLFLFFSKPEASVSMGSLLDDAKSETWFVDALNNSGILSRGLSDSAAVDCSVVNLDRVPASDSSNNLEAQADNNNKQVKNLPDVHSMPNSPLVENSSSYGSSSSSPSMANLPPIRVRVDEDGNSRLQQEQRPGIEEQFAQMTFAASGMKQDDGYNLTMLSVPMPSIPAPAAMASTAMVTGDNMNRVISDDERSDQGASAGLRKPPLPLQLVQPRTNGGLSLPSPDSIASDSSIASANSFTRSVYYQDQVQAAYVDPKASALSHTKTDISDPHPGYPRERVQDSNYTLPPQLDQNQQIQQPQQLQQQQFVPASTHYIHHPAATGPVPMSSYYPVYAPPSQQQIPHPINQQYPVYVMPVGHTQPYNITVQPNMAADPSVLASGRPPIPHSAAGTPPIYPSKSATPTIPEVAQTVYKAPVPSTPAYVQIPSGQFQQQQYVGVPQIHHQPQSIAVASSAAATTTYGYDYGGPAQDQAYHTPQQQTTPLPPQYQSMTPAAAAAALSDASKQFPAESIQQPNRTTQPSELPNVKVIENVDVHFPRRKQQLSKKLKSEV 708
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1383 708 PANTHER OS05G0427100 PROTEIN-RELATED 29 497 - -
Dere01g1383 708 Pfam PB1 domain 74 161 IPR000270 GO:0005515
Dere01g1383 708 MobiDBLite consensus disorder prediction 662 682 - -
Dere01g1383 708 Gene3D - 75 162 - -
Dere01g1383 708 MobiDBLite consensus disorder prediction 628 645 - -
Dere01g1383 708 MobiDBLite consensus disorder prediction 624 683 - -
Dere01g1383 708 SUPERFAMILY CAD & PB1 domains 73 171 - -
Dere01g1383 708 SMART PB1_new 72 161 IPR000270 GO:0005515
Dere01g1383 708 MobiDBLite consensus disorder prediction 369 385 - -
Dere01g1383 708 CDD PB1_UP2 61 161 - -
Dere01g1383 708 MobiDBLite consensus disorder prediction 343 385 - -
Dere01g1383 708 MobiDBLite consensus disorder prediction 414 463 - -
Dere01g1383 708 MobiDBLite consensus disorder prediction 439 463 - -
Dere01g1383 708 MobiDBLite consensus disorder prediction 215 268 - -
Dere01g1383 708 MobiDBLite consensus disorder prediction 215 266 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g1383 Dere-ChrDere01 26946476 26949189 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1383 57 190 MAP Kinase Kinase Kinase AT5G57610 44.853 4.99e-25 109