Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1372 ATGAGTGAAAGCACCCGGTCTGAGTCTGCCAGTGGAAATGGAACTATAAAAGTTGAGCTTCAGGACCCAAATTCAAACCCTAACCTCAAGCGGGAAGCTGATTCAGAAACTCATGATCTGACAGCGAAGAAGTTGAAAACTGAAGTTCCGATTACGTCTGATGCTTCGGGCGGTGAAGAAGCCGGAAACCCAGAAGCTGTTTTAGGTCAACAGGATGTAAAGGAAGTACATTTTGAGATTGAGGCGGATGCAGCTGAGGATAAAGGGTCTAGGCATACCATGGAAGACGCCTGGGTGGTGCTTTTGGACGCTAGTTTAGATTACCCTGGAAAACTGAGATGTGCACACTTTGTTATCTATGATGGACATGGAGGCCGGTTGGCTGCAGAATATGCTCAAAATCATTTGCATCGAAATGTTCTTTCAGCAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCCATACTAGAAGGTTTTCGCAGAACTGATGAATCCCTTCTTCAAGAGAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTAGGACAAAAAGTTTTTGTTGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAGCTAAAACTGATGGATCCCAAACTCAATCAGACGGAGTCAATCCATTGAAGGCCATTGTTTTGACGAGGGAACACAAGGCCATCTACCCACAGGAGCGTGCTCGCATTCAGAAGGCTGGTGGTGTTGTGAGCTCCAATGGGCGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCTTTTGGAGATCGCCAGTTCAAGAAGGTGGGTGTTATTGCGACCCCAGATATTCATTCTTTTGACCTTACTGATAGAGAGAATTTTATCATCCTTGGTTCTGATGGCCTATGGGGGGTATTTGGTCCTAGTGATGCTGTTGATTTTGTTCAGAAACTATTGACTGAGGGGTTGCCTGTCACAGCTGTGAGCCGCCATCTTGTAAGAGAAGCTGTCCGTGAGCGGCGCTGTAAGGATAATTGCACTGCTATTGTTATTATGGAAATTGGGACTGTTTTGGACTACTGCATTCAAGACCAATGTACAATGCACGGCTTGCCTTTCCTTGTAAAATGTTATGGCAGCTTACTCCACCACATATTTCGTAGTTCTGTTTACTGGTATGCTACTAATGAAAACTCAACCATGATTGTTGAAATTGCTGATATATATTTGAAGTGGAGGTTAGATGTTGATGTAAAGTCTAGCTGTAAATCATGCAGAATATATGGAAAGTTGAGAGGTTTTGCCCCTGCTAATCGCCCCTTCCGTTTACCCTAA 1341 0.4467 MSESTRSESASGNGTIKVELQDPNSNPNLKREADSETHDLTAKKLKTEVPITSDASGGEEAGNPEAVLGQQDVKEVHFEIEADAAEDKGSRHTMEDAWVVLLDASLDYPGKLRCAHFVIYDGHGGRLAAEYAQNHLHRNVLSAGLPRELLDVKVAKRAILEGFRRTDESLLQESAAGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSAKTDGSQTQSDGVNPLKAIVLTREHKAIYPQERARIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDLTDRENFIILGSDGLWGVFGPSDAVDFVQKLLTEGLPVTAVSRHLVREAVRERRCKDNCTAIVIMEIGTVLDYCIQDQCTMHGLPFLVKCYGSLLHHIFRSSVYWYATNENSTMIVEIADIYLKWRLDVDVKSSCKSCRIYGKLRGFAPANRPFRLP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1372 446 PANTHER PROTEIN PHOSPHATASE 2C 46 353 IPR015655 GO:0004722|GO:0006470
Dere01g1372 446 Gene3D - 65 355 IPR036457 -
Dere01g1372 446 MobiDBLite consensus disorder prediction 29 45 - -
Dere01g1372 446 MobiDBLite consensus disorder prediction 1 65 - -
Dere01g1372 446 Pfam Protein phosphatase 2C 85 343 IPR001932 -
Dere01g1372 446 ProSiteProfiles PPM-type phosphatase domain profile. 81 355 IPR001932 -
Dere01g1372 446 SUPERFAMILY PP2C-like 80 353 IPR036457 -
Dere01g1372 446 CDD PP2Cc 85 353 IPR001932 -
Dere01g1372 446 MobiDBLite consensus disorder prediction 1 28 - -
Dere01g1372 446 FunFam Probable protein phosphatase 2C 67 69 355 - -
Dere01g1372 446 SMART PP2C_4 77 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1372 Dere-ChrDere01 26654255 26662235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1372 27 307 PP2C-type Phosphatase Gene Family AT1G18030 70.307 4.61e-138 396