LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g1371	ATGGGAAGCGTTGTGACAGAGAAAGCGAATCTTCTTGCTGCACTGCTTGCTCTCCAGTTCTGCTTTGCAGGATTTCACATTGTGTCTAGACTTGCCCTTAACATTGGTGTCAGCAAAGTTGTCTACCCTGTTTATAGAAATATAATTGCTCTGCTTTTGCTGAGTCCGCTTGCTTATTTCTTAGAGAAGAATCAAAGACCACCTCTTACTTTTCCTCTACTGGTTCAGTTTTTCCTGTTAGCATTACTGGGAATTACTGCAAATCAAGGGTTTTACTTGTTAGGATTATATTATGCATCTCCGACATTTGCTTCTGCTATGCAAAACTCAGTTCCTGCCATCACTTTTGTCATGGCCTCAGCTCTAAGGCTTGAGGAACTCAACATTGCAAGCATAGATGGACTAGCAAAAGTTCTAGGAACCATTGCCAGTGTTGGGGGTGCTTCTGTGATTACCCTCTACAAAGGCCCTCCTCTTCTCCACCAGACGCACCAAGTGCAAGCAGACTCCACCCTGGAAGCAGATCAATCTTCCATAAAAATGCAAAACTGGACATGGGGTTGCATATACTTGCTTGGACATTGTCTATCATGGGCTGGCTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCAAAGCTTACACTCACGTCATTTACATGCTTCTTTGGATTGATCCAGTTCTTGATCATAGCAGCCTTTGTAGAAACTGATTTGGAGCATTGGAAGATACAATCCACAGAGGAGCTTTTTACTATCCTATACGCTGGAGTTGTAGCATCCGGCGTTGTCATATCTCTCCAAACATGGTGCATTCAGAAAGCTGGTCCCGTGTTTGTTGCTGTTTTCCAACCCATGCAAACGTTCTTAGTTGCTGTCATGGCAGCCCTAATCCTTGGTGATCAGTTATATTCTGGAGGGGTTATTGGTGCAATTCTTATTGTAGTTGGTCTCTACTTAGTCCTATGGGGCAAAACCAACGAAAAAAGAGTGACTATCCCAGAGGAGTCGTCAATAACAAAGCCACTGCTTAATTCCGAAGAGAGTAAAGAAGCTGATGCAGTTGCACAACACATACCCTGA	1089	0.438	MGSVVTEKANLLAALLALQFCFAGFHIVSRLALNIGVSKVVYPVYRNIIALLLLSPLAYFLEKNQRPPLTFPLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFVMASALRLEELNIASIDGLAKVLGTIASVGGASVITLYKGPPLLHQTHQVQADSTLEADQSSIKMQNWTWGCIYLLGHCLSWAGWMVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFVETDLEHWKIQSTEELFTILYAGVVASGVVISLQTWCIQKAGPVFVAVFQPMQTFLVAVMAALILGDQLYSGGVIGAILIVVGLYLVLWGKTNEKRVTIPEESSITKPLLNSEESKEADAVAQHIP	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g1371	362	Pfam	EamA-like transporter family	186	324	IPR000620	GO:0016020
	Dere01g1371	362	Pfam	EamA-like transporter family	15	149	IPR000620	GO:0016020
	Dere01g1371	362	PANTHER	WAT1-RELATED PROTEIN	12	338	IPR030184	GO:0016020\|GO:0022857
	Dere01g1371	362	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	241	328	-	-
	Dere01g1371	362	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	45	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g1371	Dere-ChrDere01	26649906	26652176	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere01g1371	1	352	Nodulin-like Gene Family	AT3G18200	67.787	1.48e-176	494