Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1357 ATGGATATTGAGGAGGACATCCGTTCTTTACAGCTTGATTCAGCAGAAGACAATGATGGTGTTGTTAATCCAGAGGATGCAAAGCCAGAAGAAGTTGAGAATTCCACTAAGATGGATGAAGATCCAAAGCAGGAGGTTCTGGCTCAGCCTGTCCTGGCTGAGCCAAAAGTGAAAGATAAGGAAATTCCTCCAGTGGAAGATGAAGAGGATGAGGTGGAGGCAAATGAGAAAAGACACTTGAATGTTGTGTTTATTGGTCATGTTGATGCTGGTAAGTCTACAACGGGTGGCCAGATACTTTTCCTTAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAGAAAGAAGCTAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGATACAAATGAAGAGGAGAGGGTAAAGGGAAAAACGGTTGAAGTTGGAAGAGCACATTTTGAGACAGAAAAAACAAGGTTTACAATTTTGGATGCACCTGGTCACAAGAGCTATGTCCCCAACATGATTAGTGGTGCGGCTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCACGGAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTCTCTAAGCTTCTTGTTGTTGTTAATAAAATGGATGAGCCTACAGTGAAGTGGTCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCATTTCTGAAGTCGTCAGGCTATAATGTGAAGAAAGATGTCCTGTTCTTACCAATATCTGGGCTGATTGGTGCAAACTTAAAAACAAGAGTGGATAAAAGCATTTGTCCGTGGTGGGATGGTCCCTGCCTATTCGAAGCACTTGATGGTGTTGAAGTTCCTCCTCGAGATCCCAAAGGCCCTTTCAGGATGCCTATACTTGACAAATTCAAAGACATGGGAACTGTTGTCATGGGCAAAGTGGAATCTGGTACAGTTCGTGAGGGGGATACCTTGTTGGTCATGCCAAATAAGGATCAAGTAAAAGTTACGGCTATATTCATTGATGAAGATAGGGTCAAGCGTGCTGGGCCTGGTGAGAATTTACGGATTAGAATATCTGGTGTTGAGGAAGAAGACATATTAGCTGGGTTTGTTCTGTCTAGTGTTGCAAAACCAATACTAGCTGTTACCGAGTTTGCTGCTCAGCTTCAGATCCTTGAATTGCTGGACAATGCTATTTTTACGGCTGGGTACAAGGCTGTTCTGCATATTCACTCTGTAGTTGAAGAATGTGAGATTGTTGAGCTTGTACAGCAAATTGATCCGAAGACCAAGAAGCCTATGAAAAAGAAAATTCTCTTCGTAAAAAATGGTGCTGTTGTTGTGTGCCGAATTCAGGTTAGTAATGCAATATGTATTGAGAAGTTCGCTGATTTCCCCCAACTTGGTAGGTTCACTCTCCGCACAGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACCGGTGTTTAA 1512 0.4193 MDIEEDIRSLQLDSAEDNDGVVNPEDAKPEEVENSTKMDEDPKQEVLAQPVLAEPKVKDKEIPPVEDEEDEVEANEKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKTRFTILDAPGHKSYVPNMISGAAQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVKWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPISGLIGANLKTRVDKSICPWWDGPCLFEALDGVEVPPRDPKGPFRMPILDKFKDMGTVVMGKVESGTVREGDTLLVMPNKDQVKVTAIFIDEDRVKRAGPGENLRIRISGVEEEDILAGFVLSSVAKPILAVTEFAAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELVQQIDPKTKKPMKKKILFVKNGAVVVCRIQVSNAICIEKFADFPQLGRFTLRTEGKTVAVGKVTGV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1357 503 MobiDBLite consensus disorder prediction 1 74 - -
Dere01g1357 503 FunFam Putative translation elongation/initiation factor family protein 395 503 - -
Dere01g1357 503 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 77 303 IPR000795 GO:0003924|GO:0005525
Dere01g1357 503 CDD eRF3_II 308 389 - -
Dere01g1357 503 MobiDBLite consensus disorder prediction 21 44 - -
Dere01g1357 503 Pfam Elongation factor Tu C-terminal domain 394 503 IPR004160 -
Dere01g1357 503 CDD eRF3_C_III 396 501 - -
Dere01g1357 503 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Dere01g1357 503 SUPERFAMILY Translation proteins 300 393 IPR009000 -
Dere01g1357 503 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 57 301 - -
Dere01g1357 503 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 305 391 - -
Dere01g1357 503 Pfam Elongation factor Tu GTP binding domain 77 277 IPR000795 GO:0003924|GO:0005525
Dere01g1357 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 312 IPR027417 -
Dere01g1357 503 Gene3D - 60 300 IPR027417 -
Dere01g1357 503 PRINTS GTP-binding elongation factor signature 220 229 IPR000795 GO:0003924|GO:0005525
Dere01g1357 503 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Dere01g1357 503 PRINTS GTP-binding elongation factor signature 81 94 IPR000795 GO:0003924|GO:0005525
Dere01g1357 503 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Dere01g1357 503 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 398 502 IPR009001 -
Dere01g1357 503 Gene3D Translation factors 306 391 - -
Dere01g1357 503 CDD EF1_alpha 81 302 - -
Dere01g1357 503 Gene3D Translation factors 396 503 - -
Dere01g1357 503 PANTHER TRANSLATION FACTOR 70 502 - -
Dere01g1357 503 Pfam Elongation factor Tu domain 2 321 387 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1357 Dere-ChrDere01 26447324 26457975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1357 76 503 Eukaryotic Initiation Factors Gene Family AT5G60390 37.355 5.36e-96 296