Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1341 ATGGGTGGTGGAGCAACACTGGTGGACGGGCTTCGTCGCCTCTTTCAACGTCGAACTTCATCTGCTATCAAGCCTTCGGGTGACGAGCATAGTCACAATCATAACTATTATAATGCCGATCGTAGTGCTAGCAGCAACAATAGCCACTCGTTCGTGAGAGATTTGCGCGCTCAATTGGCCACTATTCCCAATCAGGAGTGCGAGGAAGGCGAGGGACCCGAAGAGGGGCTCAGAATTGAGGAAGATTTTGATATCTCTGGCTTGAAGCTTATCAAAGTTCCTACACGGGCATACATCAAAGCAGCTTCCATGGATCCTTCAAAAAAGGGTGTACTAGAAACAGAGTTCTTCACTGAGTATGGAGAAGCAAGTCGATATCAGGTCCAAGAAGTTATTGGAAAAGGAAGTTATGGTGTTGTAGGTTCTGCCATTGATACTCATACTGGGGAAAAGGTTGCCATTAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACACGGATCTTGAGAGAAATTAAACTCCTTCGGTTGCTCCGACATCCTGATATAGTAGAAATTAAGCATATAATGCTTCCTCCTTCACGGCGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTGCGGGGCCTGAAATATATACATACAGCAAATGTGTTTCATCGTGACTTAAAGCCCAAAAATATTCTTGCTAATGCTGATTGCAAACTAAAGATTTGTGATTTTGGGCTTGCTCGAGTTTCCTTTAATGATGCTCCATCGGCTATATTCTGGACTGACTATGTTGCAACTCGATGGTATCGTGCACCAGAATTATGTGGTTCTTTTTTCTCAAAATATACCCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTATCTGGGAAGCCGTTGTTTCCTGGTAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTTCTGCTGAATCCATTTCGAGGATCCGAAATGAGAAGGCTAGAAGGTACCTTAGTAGCATGAGGAAAAAGCAACCGGTCCCATTCTCTCAGAAGTTCCCTCATGCAGATCCATTGGCTCTTCGTTTGCTGGAGCGCTTGCTTGCATTTGATCCTAAAGATCGTCCTACAGCTGAAGAGGCATTAGCTGATCCTTACTTCCGTGGTTTGTCAAATGTAGATCGTGAACCAGCTTCCACTCAACCCATCTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATATATCGAGAGATTCTAGAGTATCATCCTCAGATGCTCCAGGAATATCTGCGTGGTGGAGATCAGACCAGCTTCATGTATCCAAGTGGTGTGGATCGGTTCAAGCGGCAGTTTGCACATCTTGAGGAGCACTATGGCAAAGGTGAACGAAGCACTCCTTTGCAGAGACAGCATGCCTCTTTGCCTAGAGAGCGAGTACCTGCTCCGAAGGAGGAACCTGGTCAAAATGATGATTTTGAAAGGCGAACAGCTGCTGCTGTTGAAACAACTCTACAGAGTCCTCCGACTGATGCTGGAAACTCAAATGCACAAACTGGGCCTGCCAAACTGAACCAAAGTACACGTAGCCTGTTGAAGAGTGCCAGCATCAGTGCTTCCAAGTGTATAGGTGTGAAACCAAGTAAAGATCCAGAGGAGGAGCCGATTCCTGAGGTCAATGATGAGGAACTAGATGGGTTGACAGAGAAGGTCGATGCCCTCCACGCTTAG 1848 0.4453 MGGGATLVDGLRRLFQRRTSSAIKPSGDEHSHNHNYYNADRSASSNNSHSFVRDLRAQLATIPNQECEEGEGPEEGLRIEEDFDISGLKLIKVPTRAYIKAASMDPSKKGVLETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPSAESISRIRNEKARRYLSSMRKKQPVPFSQKFPHADPLALRLLERLLAFDPKDRPTAEEALADPYFRGLSNVDREPASTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVPAPKEEPGQNDDFERRTAAAVETTLQSPPTDAGNSNAQTGPAKLNQSTRSLLKSASISASKCIGVKPSKDPEEEPIPEVNDEELDGLTEKVDALHA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1341 615 ProSitePatterns MAP kinase signature. 161 264 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dere01g1341 615 Pfam Protein kinase domain 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1341 615 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 125 471 - -
Dere01g1341 615 MobiDBLite consensus disorder prediction 497 615 - -
Dere01g1341 615 Gene3D Phosphorylase Kinase; domain 1 142 464 - -
Dere01g1341 615 FunFam Mitogen-activated protein kinase 442 464 - -
Dere01g1341 615 ProSitePatterns Protein kinases ATP-binding region signature. 132 156 IPR017441 GO:0005524
Dere01g1341 615 MobiDBLite consensus disorder prediction 539 576 - -
Dere01g1341 615 MobiDBLite consensus disorder prediction 21 48 - -
Dere01g1341 615 MobiDBLite consensus disorder prediction 516 537 - -
Dere01g1341 615 SMART serkin_6 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1341 615 FunFam Mitogen-activated protein kinase 212 441 - -
Dere01g1341 615 FunFam Mitogen-activated protein kinase 115 220 - -
Dere01g1341 615 CDD STKc_TDY_MAPK 125 463 - -
Dere01g1341 615 SUPERFAMILY Protein kinase-like (PK-like) 121 422 IPR011009 -
Dere01g1341 615 Gene3D Transferase(Phosphotransferase) domain 1 212 441 - -
Dere01g1341 615 ProSiteProfiles Protein kinase domain profile. 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1341 Dere-ChrDere01 26198683 26204835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1341 112 615 MAP Kinase Gene Family AT3G18040 83.597 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere01g1341 Pkinase 2.1e-68 CL0016