Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1338 ATGAAGAACATTCTTAAGAAGCTTCATATCGTGTCCCATCAATCCGAAGATGCTGAAGGGTCTACTTCATCAAGGGGAAACAAGTCTAGTGATGGTTCGTCCCCTAGGAAGCATTCTCACCCTCGGTCCCCCCAAATTCCTGAGAATAAGCCCTTTTCAGGGCTTTCAAATTGGTTGCATTCAGTTGCTAATAAGCAGAGCCCGAGTCCTCCATCTTCGAACCTCACCAGAGGAGAAAGACTGGAGCCATCTGATTCAATGAGCAGTGGTGGTTTGAATATGGTTTCTGATTCTGTGAGACATGATTCTGGTTCTAGCTCGTCGAAGGATCCTGACATAGAGGAAGAGTATCAGATTCAACTAGCTTTAGAACTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAAATTGAAGCTGTTAAGCAGATCAGTTTAGGCTCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGATACTGGAATTACAATGCTCTTGGGTATGATGACAAGATTCTAGATGGTTTCTATGATCTTTATGGGGTTGTGACTGAGTCAGCCTCTGCAAGAATACCAACCCTTGTAGATCTGCAAGGAACATCAACCTCAGATAGTGTCACATGGGAAGCAGTCTTAGTTAATAGGGCTGCTGATTTTAATCTGTCAAAACTTGAGCAAAAAGCCCTGGAGCTGGTGGTCAAGTCAAGATCAGATGTTGAAGTAGAAGTAACTAGCAATTTGGTGCAGAAGCTTGCCATATTAGTGGCAGACTATATGGGTGGACCAGTTGCGGATCCTCAAAGTATGACAAGTACATGGCAGAGTCTTAGTTACAGTCTAAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACCATTGGATTGGCTCGGCACCGTGCATTGTTATTCAAGGTTTTAGCTGATTGCATGGGTGTCCCATGTCGGTTGGTGAAAGGACAGCAATATACAGGTTCTGATGATGTGGCAATGAACTTTATCAAGATTGCTGATGGAAGGGAGTACATTGTTGACCTGATGGCTGATCCTGGGACGCTTATTCCAGCTGATGCAACTGGATCACATATTGAATATGATGAATCATTATTTTTGGCCACTCCTTCAACAAGAGACCTTGATTCCTCTCATGTAGCATCATCCAGCAGTGGCACTGGAAGTTCATCTGAAGAAACTTCAAATGTTGGGGCATTGGATGAATTGAACAAATCAAAGCAGTTTGCATATGCAGCATCTGATGAAAGCAGGCCTGCTACTGGAAAGGAAGAATCAAAGGGACCCTTGCATGATTTCAAAAGCCCTCTCAATGTTGAGAAGAACACCGTGCTGGTAACTCCGGGTAGACCTAATTATACTTATGGGCATGCAAGATCTCCTTCCTGGACTGAAGGGATCAGTTCCCCTGCAGCACGTAGAATGAAAGTCAAAGATGTTTCACAATATATGATTGATGCCGCCAAGGATAATCCTAACTTAGCTCAAAAGCTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCGAAACTTATTTTCTGAAATTTATCACGAGCAATTAGGTGCCCCGTCCCTGACTGAAGAAAAATATGAATGTAAACAAGGGAGTGTCCAGCAAGAAACTCAGGTTGCTGATAATGTAGGTCCTGCTCGATTTTTGCCTCCTTTGCCTCACTACAGATTTCATCCCAAAGCTAGTACTGGCAGTCAGCTGGAGCATTCTAAGCCTGTAGAAGGTCTAGGAATCAACCTTCCTCTTGATACAAGGGAAGCAGCTGGACAGTACATACCGTCACAGGAAGAAGCTACTCCTGTGAAATATGGGAAAAATGTCCCGGTTGCTGCAGCTGCAGCAGCAGCTGCTGCTGTTGTTGCATCTTCCATGGTAGTTGCTGCGGCAAAGTCAAGCACTGACTCAAATATTGAGCTACCTGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTGGCAACCACTGCTGCTGTCAATAAACAATATGAGCAGGGCAGTCGAAGCGAAGGAGATACTGATGGAACTTCTGAGCCAAAGGGTAGTGGTGAAGGAGAACATGGTGCATTAGGAGCAAACTCAGAAGGCGAGAGAATATCTGATATATCAGTAAGTAACGGAAGCACAAAATCTGATTCTGCACTAGATGATGTTGCAGAGTATGAGATTCCATGGGAGGAAATGACGCTGGGTGAGCGTATCGGACTTGGATCATATGGGGAAGTGTACCATGGTGAATGGAGAGGAACTGAAGTTGCTGTGAAGAGGTTTCTAGATCAAGATATATCTGGTGAATCACTAGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAATTCGACCTCCAAATCTTTCAATTGTTACGGAATTTCTTCCCAGAGGCAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTGGATGAGCGAAGGCGATTGAGGATGGCTCTTGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCTCTCCAATGATAGTCCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGATTGTCACGAATGAAGAATAGTACGTTCCTTTCTTCCAGATCAACTGCTGGGACTGCTGAGTGGATGGCTCCAGAAGTGTTAAGAAATGAACCTTCAGATGAAAAGTGTGATGTTTTTAGCTTTGGGGTCATATTATGGGAGCTCTCTACACTTCAGCAACCATGGTGGGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGCTTCCAACATCGCCGTCTTGACATTCCAGATTATGTGGATCCTGCTGTGGCGGATATTATCAGGAAATGCTGGCAGACAGATCCAAAGCTAAGACCGACATTTGCCGAGATCATGGCTGCTCTGAAGCCGTTGCAGAAGCCAATTGTCAGTTCTCATGTGCCTAGGCCTGGTGCACAGTCAAAACGAGTTGTAGAAGATGCAGCAGAATAA 3066 0.4446 MKNILKKLHIVSHQSEDAEGSTSSRGNKSSDGSSPRKHSHPRSPQIPENKPFSGLSNWLHSVANKQSPSPPSSNLTRGERLEPSDSMSSGGLNMVSDSVRHDSGSSSSKDPDIEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGVVTESASARIPTLVDLQGTSTSDSVTWEAVLVNRAADFNLSKLEQKALELVVKSRSDVEVEVTSNLVQKLAILVADYMGGPVADPQSMTSTWQSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADCMGVPCRLVKGQQYTGSDDVAMNFIKIADGREYIVDLMADPGTLIPADATGSHIEYDESLFLATPSTRDLDSSHVASSSSGTGSSSEETSNVGALDELNKSKQFAYAASDESRPATGKEESKGPLHDFKSPLNVEKNTVLVTPGRPNYTYGHARSPSWTEGISSPAARRMKVKDVSQYMIDAAKDNPNLAQKLHDVLLESGVVAPRNLFSEIYHEQLGAPSLTEEKYECKQGSVQQETQVADNVGPARFLPPLPHYRFHPKASTGSQLEHSKPVEGLGINLPLDTREAAGQYIPSQEEATPVKYGKNVPVAAAAAAAAAVVASSMVVAAAKSSTDSNIELPVAAAATATAAAVVATTAAVNKQYEQGSRSEGDTDGTSEPKGSGEGEHGALGANSEGERISDISVSNGSTKSDSALDDVAEYEIPWEEMTLGERIGLGSYGEVYHGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVFSFGVILWELSTLQQPWWGMNPMQVVGAVGFQHRRLDIPDYVDPAVADIIRKCWQTDPKLRPTFAEIMAALKPLQKPIVSSHVPRPGAQSKRVVEDAAE 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1338 1021 MobiDBLite consensus disorder prediction 1 113 - -
Dere01g1338 1021 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 98 998 - -
Dere01g1338 1021 MobiDBLite consensus disorder prediction 383 404 - -
Dere01g1338 1021 MobiDBLite consensus disorder prediction 711 726 - -
Dere01g1338 1021 MobiDBLite consensus disorder prediction 675 726 - -
Dere01g1338 1021 SMART serkin_6 741 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1338 1021 ProSitePatterns Protein kinases ATP-binding region signature. 747 768 IPR017441 GO:0005524
Dere01g1338 1021 SUPERFAMILY Protein kinase-like (PK-like) 726 992 IPR011009 -
Dere01g1338 1021 MobiDBLite consensus disorder prediction 417 442 - -
Dere01g1338 1021 ProSiteProfiles Protein kinase domain profile. 741 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1338 1021 PRINTS Tyrosine kinase catalytic domain signature 920 942 IPR001245 GO:0004672|GO:0006468
Dere01g1338 1021 PRINTS Tyrosine kinase catalytic domain signature 964 986 IPR001245 GO:0004672|GO:0006468
Dere01g1338 1021 PRINTS Tyrosine kinase catalytic domain signature 815 828 IPR001245 GO:0004672|GO:0006468
Dere01g1338 1021 PRINTS Tyrosine kinase catalytic domain signature 854 872 IPR001245 GO:0004672|GO:0006468
Dere01g1338 1021 PRINTS Tyrosine kinase catalytic domain signature 901 911 IPR001245 GO:0004672|GO:0006468
Dere01g1338 1021 MobiDBLite consensus disorder prediction 680 694 - -
Dere01g1338 1021 MobiDBLite consensus disorder prediction 49 102 - -
Dere01g1338 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 860 872 IPR008271 GO:0004672|GO:0006468
Dere01g1338 1021 CDD STKc_MAP3K-like 747 993 - -
Dere01g1338 1021 Gene3D Transferase(Phosphotransferase) domain 1 820 1003 - -
Dere01g1338 1021 Pfam Ethylene-responsive protein kinase Le-CTR1 154 357 - -
Dere01g1338 1021 Pfam Protein tyrosine and serine/threonine kinase 742 993 IPR001245 GO:0004672|GO:0006468
Dere01g1338 1021 MobiDBLite consensus disorder prediction 15 30 - -
Dere01g1338 1021 Gene3D Phosphorylase Kinase; domain 1 734 818 - -
Dere01g1338 1021 FunFam Serine/threonine-protein kinase CTR1 820 1003 - -
Dere01g1338 1021 FunFam Serine/threonine-protein kinase isoform 1 732 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1338 Dere-ChrDere01 26114733 26124471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1338 1 1008 MAP Kinase Kinase Kinase AT1G73660 63.957 0.0 1179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dere01g1338 PK_Tyr_Ser-Thr 5.6e-67 CL0016