Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1328 ATGTGGATGGTGGGTTATAATGAAGGGTGTGAGTTCAACATGCCTGACCATGCATTTAATGGAAGGAAGCTTAGGCCTTTAATTCCAAGGCCACTGACTTCTCCTACGGTTCATCATGCCACCGATTTCTTCACACAGTATCACAATCTGGCATCAGTAGCGGAGCAGAGCAAGGGGGAGTTCAACACTACTCCTCCAGTTGTGGTGAGCACTAGGTGGAATCCTACCCCAGAGCAGCTGAGAGCTCTGGAAGAGTTGTATCGGCGAGGGACAAGAACACCATCTGCAGAGCAAATTCAGCATATCACTGCACAGCTTCGGAGATTTGGGAAAATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAAAAACGACGCCGTCAAGTGGAATCAGCTGCAGAGGGACACCCCTGTGATCTTGATGCTCTAGAAAAGAAAGACTTAGGCGCAAGTAGGACAGCGTTTGAAGTTGAACAGACTAGCAAGAACTGGGCACCCTCTACAAACTGCAGTAGTACTCATGCAGAGGAATCTGTCTCCATACAAAGGGTAGCAAAAGCAGCAGCAGCAGTAGCAGTTGCAGATCAGTGTAGAACAGATGGATGGGTTCAATTCCATGAAGGAGAATTACAACAAAGAAGAAACTTCATGGAAAGGAATGCCACGTGGCAGATGATGCAGCCATCTGGTCCTCCTCCTACAGCTGCTTCTACTGCTGCCTCTACAACTAGCATTGAAGCCACTACAGCCACAGTAATGGACCCAAAGCTCATAAAAAACCATTTTGATTTCAGCTTTTTCATTACGCCTATCCACTCGAACAGTAGTATCAGTAGCGAAGATGATCATAACAACTGTGTGGAATCCCAAACCCTTCAACTTTTCCCACTGAGGAGCGGAGGAGATGGCTGCAATAGCATTAACCAGAAAGAGACAGAGATATCAGTATCAGCAATGAATGCCAACTTGACCCCAAGCCAGTTTTTTGAGTTCCTTCCACTGAAGAACTGA 1032 0.4632 MWMVGYNEGCEFNMPDHAFNGRKLRPLIPRPLTSPTVHHATDFFTQYHNLASVAEQSKGEFNTTPPVVVSTRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVESAAEGHPCDLDALEKKDLGASRTAFEVEQTSKNWAPSTNCSSTHAEESVSIQRVAKAAAAVAVADQCRTDGWVQFHEGELQQRRNFMERNATWQMMQPSGPPPTAASTAASTTSIEATTATVMDPKLIKNHFDFSFFITPIHSNSSISSEDDHNNCVESQTLQLFPLRSGGDGCNSINQKETEISVSAMNANLTPSQFFEFLPLKN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1328 343 SUPERFAMILY Homeodomain-like 71 135 IPR009057 -
Dere01g1328 343 Pfam Homeodomain 71 130 IPR001356 GO:0003677
Dere01g1328 343 CDD homeodomain 71 132 IPR001356 GO:0003677
Dere01g1328 343 Gene3D - 69 131 - -
Dere01g1328 343 SMART HOX_1 68 135 IPR001356 GO:0003677
Dere01g1328 343 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 55 338 IPR044555 GO:0003700|GO:0099402
Dere01g1328 343 FunFam WUSCHEL-related homeobox 4 70 137 - -
Dere01g1328 343 ProSiteProfiles 'Homeobox' domain profile. 76 131 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1328 Dere-ChrDere01 25997585 25999567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1328 1 343 Wox Gene Family AT3G18010 39.323 1.74e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere01g1328 Homeodomain 1.4e-19 CL0123