Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1305 ATGGTCTTCAAGGGCAGGTTCTTCAGCTTCAAGAAATCCGACTCTTCCAGCCCCGATGGATCACCCAATAGCCCCCGATCATTCGGCTCCAATTCCCCCAGGAGATCCGAGAAGAAGAAGGTCAAATCAACTGCCAAGGAATCCCAGATCGCTAGCACTAGTAGTACTGCCACTGGCACCGGCTTCGGTGCGGCGGCGGCGGCGGGCCGCCAAACGCAAGTGAAGGACGGGACTAAGAAGAAGGATGCGAAGGGCAAGTATAGTCAAACTCAAGAAGAGTCCCGTTGGTCTTCGTCGACGCCAAGCTCTGGAGGGGAATCAGGTTCTAGTTTGTTACCGAGTTCTGGGTTGAAGTCAAAGAAGGTTGCCGCGGGGGCGGCAGGCGGGAAGGAATTGCTGTCATCGTCGGTTTCGCCAATTTTGGCATCGTCCCTTGGACTAAATAGGATAAAGACGCGATCAGGGCCACTGCCACAGGAGAGCTTCTTCGGTTTTAGGAATGATAGGGGGTCGACACTTGGTGCAAGTAATCTCTCCAGGCCTGGTGGTGATGATGGAAAGAAGAAGGAGTCGGTGAATTACGGTAGATTGCCGTTTCAAGAGAGTTCTGGAAGCGGAAACTGGGTTGATAACGGGAGCAATTCGGATAGTATGTCCACTGGGAGTGCTCCGTCCAGGGACCAGAGTCTGAATTTATTGCCACGGTCGCAGCTACAGAACGGGGAATCGTACTCGGAAGCAGGGAGACAGGAATCGACACAGGCTCAATCTCAAGGTTTACAAAGTGCAGATGTTTGCACTCCAGAGACAGCATATGATTATGAAAACCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCTTTATTACGCGTTACAAGTGCACCTAGAAAGAGGTTTCCTGCTGACATTAAGAGTTTTTCTCATGAGTTGAATTCTAAAGGTGTTCGGCCTTTTCCATTTTGGAAGCCTCGGGGATTAAATAACTTGGAGGAGATCTTGGTTGTCATCCGGGCAAAATTTGATAAAGAAAAGGAAGAAGTGAACTCTGAATTGGCTATTTTTGCAGCTGATCTGGTTGGAATTCTAGAAAAGAATGCAGATACTCATCCTGAGTGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCCAGGAGCTGTGCTATGACTTCACCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAATTGGATGATAGGCGTCAAGAACTTCCTCCAGGGATGCTTAAGCAGCTTCATACCCGAATGCTTTTCATTCTCACAAGGTGTACAAGGTTGTTACAATTCCACAAGGAAAGTGGTTTGGCAGAGGATGAACACGTTTTCAATCTCCGTCAATCTAGAGTCTTGCACTCCGCTGAAAAAAGGATTCCTCCTGGTTTGGGAAGGGATGAAAAAAGTTCTAGTGCTGCAAAGGCTTCAGCCAAAAAATCTTATAGTCAGGAGCAGCATAGCATGGATTGGAAGAAAGATGTTATGCAGCCAGAAAAACTTTCCCTTCGTGCTGGTGACACTTCAAAACAAGATTCCTTTTCAGGCATGGATAGGATGGCTTCTTGGAAGAAATTCTTATCTCCCCCAAGTAAAAGCCCAAAAGAAGCAGCTCAGTTGAAGGACCAGAATTTTGGGAGGGCTGAACCTTCAAAAGTATCAATTAATAAGAGATCAAATTCTGATGCAGATCTGTCTGCTGCTAAGCCATCTGAGCTTCATCATATTAAAGATTCCCAAGAGCATGCTTCCAAGCACCAACACAAGGTTTCCTGGGGCTACTGGGGTGAGCATCAGAATATTGGTGAGGAGAATTCAATAATTTGTCGTATATGTGAGGAGGAAGTTCCTACTTCACATGTTGAAGAACATTCAAGGATTTGTGCAATTGCTGATAGATGTGATCAGAAGGGTCTGAGTGTCAATGAGCGTCTTGTTAGAATTGCGGAAACTTTAGAAAAGATAATGGAATCATGTACGCAGAAGGATATCCAGCAAATAGTTGGAAGTCCTGATATTGGAAAGGCGTCAAATTCAAGCATGACTGAAGAATCTGATGTTCTCTCTCCTAAACTCAGTGATTGGTCTCGAAGAGGCTCAGAGGATATGTTAGACTGTTTCCCTGAAGCTGATAATTCTGCTTTTATGGATGACTTAAAAGTATTACCTCTGATATCATGTAAGACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACTTCGTCTGCAGGGAGCATGACTCCTAGATCTCCCTTAATGACACCAAGGACGAGTCAGATTGATCTACTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATTTTCCCCAGATGAATGAACTTGCTGATATAGCAAGATGTGTAGCAAATACTTCTCTGGAAGATGATCGCTCAATGTCATATCTATTATCTTGTCTCGATGACTTGCAAGTTGTTGTAGACCGAAGAAAATTTGATGCACTTACAGTGGAGACGTTTGGAACACGCATTGAGAAGTTAATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGAAGATGAAAAGATAGATATAACAAGCACTGTAATTGATGAAGATGCTCCCTTGGAGGATGATGTGGTTCGTAGCTTGAGAACAAGCCCTATCCATTCTTCGAAGGACCGTACTACTATTGATGATTTTGAGATTATAAAACCTATTAGTCGGGGAGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAACCACTGGGGATCTTTTTGCGATAAAGGTTCTTAAGAAGGCAGATATGATCCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTCCGCAATCCTTTTGTGGTTCGTTTCTTTTATTCTTTTACATGTAGCGAGAACTTGTATCTTGTCATGGAATATCTCAATGGAGGTGACCTGTATTCATTATTGAGGAATTTAGGTTGCCTGGGTGAGGAAGTTGCTCGCATGTATATTGCTGAAGTGGTGCTTGCATTGGAATATTTGCATTCATTGCGGGTGGTTCACCGTGACTTGAAGCCTGATAATTTGTTGATTGCGCATGATGGTCACATTAAGTTGACAGACTTTGGGCTTTCAAAAGTTGGTCTAATCAACAGCACTGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGTGAGGATGAACCTCAGTTATCTGCATTTGAACATCAAAGTGAAAGGAGGAAGAAACGTTCTGCTGTGGGTACACCTGATTATTTGGCACCCGAGATACTTTTGGGAACTGGGCACGGTTATACTGCAGATTGGTGGTCTGTTGGTGTCATTCTATTTGAGTTGCTTGTTGGCATTCCTCCCTTCAATGCGGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAATATACCATGGCCCCGGGTGCCAGAAGAAATGAGTCCTGAAGCACAAGATCTTATTGATAGATTATTGACTGAAGATCCTAATCAGAGACTTGGAGCCAGGGGCGCATCGGAGGTGAAGCAGCATATTTTTTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTGGATACTAGTTATTTCACAAGTCGCTATTCATGGAATACTTCTGATGGCCTCGTATATCCAGTGAGTGACATTGAGGAATATAGTGATGCTGATAGTTTAAGTGGCAGTAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCGGAGTTTGAGTCTGGTTCATCCGTCAATTACTCCTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTTCTCACCAAGGGATGGAAAGATGACCCGTCTACAAATTCTAGGCCATTCGCACCTTTGTTTTTTTTTGTATACCTTGTACATAGATTTAAGAGTCCCAAGCTGGTTCAGAATGCGCACTTTATTTGTTAG 4005 0.4412 MVFKGRFFSFKKSDSSSPDGSPNSPRSFGSNSPRRSEKKKVKSTAKESQIASTSSTATGTGFGAAAAAGRQTQVKDGTKKKDAKGKYSQTQEESRWSSSTPSSGGESGSSLLPSSGLKSKKVAAGAAGGKELLSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRNDRGSTLGASNLSRPGGDDGKKKESVNYGRLPFQESSGSGNWVDNGSNSDSMSTGSAPSRDQSLNLLPRSQLQNGESYSEAGRQESTQAQSQGLQSADVCTPETAYDYENPKESESPRFQALLRVTSAPRKRFPADIKSFSHELNSKGVRPFPFWKPRGLNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGILEKNADTHPEWQETIEDLLILARSCAMTSPGEFWLQCEGIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKRIPPGLGRDEKSSSAAKASAKKSYSQEQHSMDWKKDVMQPEKLSLRAGDTSKQDSFSGMDRMASWKKFLSPPSKSPKEAAQLKDQNFGRAEPSKVSINKRSNSDADLSAAKPSELHHIKDSQEHASKHQHKVSWGYWGEHQNIGEENSIICRICEEEVPTSHVEEHSRICAIADRCDQKGLSVNERLVRIAETLEKIMESCTQKDIQQIVGSPDIGKASNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKVLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDFPQMNELADIARCVANTSLEDDRSMSYLLSCLDDLQVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVEDEKIDITSTVIDEDAPLEDDVVRSLRTSPIHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLGEEVARMYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQLSAFEHQSERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRNIPWPRVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKQHIFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPVSDIEEYSDADSLSGSSSCLSNRQDEVGDECGGLAEFESGSSVNYSFSNFSFKNLSQLASINYDLLTKGWKDDPSTNSRPFAPLFFFVYLVHRFKSPKLVQNAHFIC 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1305 1334 MobiDBLite consensus disorder prediction 490 505 - -
Dere01g1305 1334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1014 1026 IPR008271 GO:0004672|GO:0006468
Dere01g1305 1334 MobiDBLite consensus disorder prediction 461 574 - -
Dere01g1305 1334 Gene3D Transferase(Phosphotransferase) domain 1 979 1202 - -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 136 150 - -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 554 571 - -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 74 89 - -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 1 264 - -
Dere01g1305 1334 Coils Coil 326 346 - -
Dere01g1305 1334 Gene3D Phosphorylase Kinase; domain 1 893 1213 - -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 196 264 - -
Dere01g1305 1334 PANTHER SERINE/THREONINE-PROTEIN KINASE 567 1278 - -
Dere01g1305 1334 Pfam Protein kinase domain 895 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1305 1334 MobiDBLite consensus disorder prediction 46 61 - -
Dere01g1305 1334 SUPERFAMILY Protein kinase-like (PK-like) 892 1225 IPR011009 -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 90 116 - -
Dere01g1305 1334 SMART serkin_6 895 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1305 1334 MobiDBLite consensus disorder prediction 10 31 - -
Dere01g1305 1334 CDD STKc_MAST_like 901 1189 - -
Dere01g1305 1334 ProSiteProfiles Protein kinase domain profile. 895 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1305 1334 FunFam probable serine/threonine protein kinase IREH1 893 982 - -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 675 699 - -
Dere01g1305 1334 MobiDBLite consensus disorder prediction 675 694 - -
Dere01g1305 1334 ProSiteProfiles AGC-kinase C-terminal domain profile. 1185 1289 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1305 Dere-ChrDere01 25627422 25642291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1305 1 1301 AGC Kinase Gene Family AT3G17850 66.164 0.0 1672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Dere01g1305 Pkinase 1.1e-65 CL0016