Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1301 ATGTTCCTTCTTTCTGTCGTGATCTTCTTCATCATCTTCCACCCCTCAAGTGTCAAGTTCTACGTCACAGAGGACTCCCTCACACAGTTTAATCTCACCAGCAATAACACCCTTTCTTACAACTTCAGAGTGAACATCACAGTGAGGAACCCCAACAAACACATCGTTGTCTATTACAGAAGCATCGGAGCAGTTGCATGGTACAAGAAGAGAACGTTTGCTTGGGCAAACTTAGCACCCTTTGTTCAGGGCCACAAGAACACGAGCTTCCTACAACCAGCAGTGTTCGAAGGTCAGAGAGTGATTGATCTTGAGCCTCGCCATGTGAATGAGTATGAGGAAGAGACAAGGGCAGGGATTTATGACAGCATAGTTGTGGAATTGAATATTCGAGTCAGGGCGAAGTATGGGAAGATCAAATAG 423 0.4539 MFLLSVVIFFIIFHPSSVKFYVTEDSLTQFNLTSNNTLSYNFRVNITVRNPNKHIVVYYRSIGAVAWYKKRTFAWANLAPFVQGHKNTSFLQPAVFEGQRVIDLEPRHVNEYEEETRAGIYDSIVVELNIRVRAKYGKIK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1301 140 PANTHER OS05G0367900 PROTEIN 4 138 IPR044839 GO:0098542
Dere01g1301 140 Pfam Late embryogenesis abundant protein 45 137 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1301 Dere-ChrDere01 25573326 25573748 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1301 12 133 SNARE and Associated Proteins AT1G32270 32.787 5.09e-16 71.2